| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0986 |
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| Symbol | gcvT-1 |
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| ID | 1044911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1124019 |
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| End bp | 1125140 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637144381 |
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| Product | glycine cleavage system T protein |
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| Protein accession | NP_743147 |
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| Protein GI | 26987722 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.761545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAA CACTGCTCAA GACCCCACTG CATGCCCTGC ATCTGGAACT GGGTGCACGC
ATGGTGCCGT TCGCCGGCTA CGACATGCCG GTGCAGTACC CGCTGGGCGT GCTCAAGGAA
CACCTGCACA CCCGCGAGCA GGCCGGCCTG TTCGACGTCT CGCACATGGG CCAGATCATT
CTGCGTGGCG CTGACGCCGC CAAGGCGCTG GAAAGCCTGG TACCGGTGGA CATCATCGAC
CTGCCAGTGG GTATGCAGCG CTATGCCATG TTCACCAATG AGCAAGGCGG CATTCTCGAC
GACCTGATGG TTGCCAACCT GGGCGAGGAC ACCCTGTTCC TGGTCGTCAA CGCCGCCTGC
AAGGAGCAGG ACCTGGCTCA CCTGCAAACC CACATCGGCA GCCGTTGCGA GGTGCAGCCG
CTGTTCGAGG AGCGTGCCCT GCTCGCCCTG CAAGGCCCGG CTGCAGTCAA GGTGCTGGAA
CGCCTGGCTC CAGAAGTGGC CGGCATGACC TTCATGCAGT TCCGCCGGGT AAAACTGCTG
GGTGTGGACT GCTTCGTCAG CCGCTCGGGC TACACCGGCG AAGACGGCTA CGAGATCTCG
GTACCGGTCA ACGCTGCCGA CGCCTTGGCC CGCCGCCTGA TGGCCGAGCC GGAAGTACAG
CCGATCGGCT TGGGCGCACG CGACTCGCTG CGCCTGGAAG CTGGCCTGTG CCTGTATGGC
CACGACATGA ACAGCGAGAC TACGCCGATC GAAGCCAGCC TGCTGTGGGC AATTTCCAAG
GTGCGCCGTG CCGACGGTGC ACGTGCTGCC GGCTTCCCGG GTGCCGAGGC GATCTTCGCC
CACGTGCGCG ATGGTGTTGC GCGCAAACGT GTCGGCCTGC TGCCGCAGGA GCGTACGCCT
GTTCGTGAAG GTGCGGACAT TGTCGACGCA AACGATAAAC CGGTGGGTAA AGTGTGCAGC
GGGGGCTTTG GCCCGACACT CGCTGCCCCT GTCGCCATGG GTTATATCGA TAGTGAACAT
GCTGCACTCG ACACCGCACT GTTTGCCGTG GTGCGTGGAA AGAAGGTGGC CTTGAAAGTC
AGCAAAATGC CTTTCGTGAC ACCACGTTAC TACCGTGGCT GA
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| Protein sequence | MSETLLKTPL HALHLELGAR MVPFAGYDMP VQYPLGVLKE HLHTREQAGL FDVSHMGQII
LRGADAAKAL ESLVPVDIID LPVGMQRYAM FTNEQGGILD DLMVANLGED TLFLVVNAAC
KEQDLAHLQT HIGSRCEVQP LFEERALLAL QGPAAVKVLE RLAPEVAGMT FMQFRRVKLL
GVDCFVSRSG YTGEDGYEIS VPVNAADALA RRLMAEPEVQ PIGLGARDSL RLEAGLCLYG
HDMNSETTPI EASLLWAISK VRRADGARAA GFPGAEAIFA HVRDGVARKR VGLLPQERTP
VREGADIVDA NDKPVGKVCS GGFGPTLAAP VAMGYIDSEH AALDTALFAV VRGKKVALKV
SKMPFVTPRY YRG
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