Gene PP_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0969 
Symbol 
ID1044889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1109333 
End bp1109983 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content64% 
IMG OID637144364 
ProductGntR family transcriptional regulator 
Protein accessionNP_743130 
Protein GI26987705 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAG AGCTGACCAA GCGCTCCCTG GTGGAGTTGG CGGTAGAGCG CATGCGCGAA 
TGCATCGTGT TGGGCGATTG GCAGGTCGGT CAGCGCCTGC CTACCGAGCC AGAGCTTGCC
TTGCAGCTGG GCATCAGCCG CAACACCGTG CGTGAGGCCA TGCGCGTGCT GGCGTTCAGT
GGCCTGGTGG AAATTCGCCA GGGCGACGGC AGCTACCTGC GCACTGCCCA GGACCCGCTG
CAGGCGGTGC ACGCGATGTC CCGGTGTACG CCCGAGCAGG CCCGTGAAAC CCGCCATATT
CTCGAGGCGG AGGCCGTCGG GCTGGCGGCC TTGCGCCGTA CCGATGCCGA CCTGCAAGCG
CTACGGGATG CCCTGGAAGG CAGTGCCGGG CATTTTCACG GCGATGTCGA TGCCTATGTG
GCCTGCGACC TGGTGTTCCA CCAGCGGCTG GTCGATGCCG CCCACAACCC GGCATTAAGC
GAGCTGTACC GTTACTTTTC CGGGGTCGTG GCTGCCGCTC TGCAACACAA TATGGCCACC
GTTCCGCGCT GCCAGGCCAC GTTCGACTTG CATGGGCAGA TCCTCGACGC CATCGAGCAA
CGTGACGCTG AACGGGCCAA GCGCCTGACC CGTATCCTCA TTGAATCCTG A
 
Protein sequence
MNTELTKRSL VELAVERMRE CIVLGDWQVG QRLPTEPELA LQLGISRNTV REAMRVLAFS 
GLVEIRQGDG SYLRTAQDPL QAVHAMSRCT PEQARETRHI LEAEAVGLAA LRRTDADLQA
LRDALEGSAG HFHGDVDAYV ACDLVFHQRL VDAAHNPALS ELYRYFSGVV AAALQHNMAT
VPRCQATFDL HGQILDAIEQ RDAERAKRLT RILIES