Gene PP_0959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0959 
Symbolttg2B 
ID1044875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1100618 
End bp1101418 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content61% 
IMG OID637144354 
Producthypothetical protein 
Protein accessionNP_743120 
Protein GI26987695 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATGCGCA GAAAATCCTT ACTCGAGCGT GTCCGCCTGC TGGGCCGCTC GGCAATCGAC 
GTGCTGGCCG TGCTCGGGCG TTCGTGCCTG TTCCTGTTCC ATGCGCTGGT CGGTCGCGGT
GGTATTGGCG GCGGCTTCCA GCTGCTGACC AAGCAGTTGT ACTCGGTGGG TGTGCTGTCG
CTGGCGATCG TCGTCGTGTC CGGTGTGTTC ATCGGCATGG TGCTGGCGCT GCAGGGCTAC
AGCATCCTGA CCAAGTACGG CTCGGAGCAG GCGGTAGGGC AGATGGTCGC CCTGACCCTG
CTGCGTGAAC TTGGCCCGGT GGTAACGGCG TTGCTGTTCG CCGGGCGTGC CGGTTCCGCG
CTGACCGCCG AAATCGGCAA CATGAAGTCC ACCGAGCAGT TGTCGAGCCT GGAAATGATC
GGTGTCGACC CGCTCAAGTA CATCGTTGCG CCACGCCTGT GGGCCGGTTT CATCTCGCTG
CCGCTGCTGG CGCTGATCTT CAGCGTGGTC GGTATCTGGG GTGGCTCGTG GGTGGCGGTG
GACTGGCTGG GTGTCTACGA GGGCTCGTTC TGGGCCAACA TGCAGAACAG TGTTTCTTTC
ACTGACGACG TGCTCAACGG GCTGGTCAAG AGCGTGGTGT TTGCTTTCGT CTCGACCTGG
ATCGCCGTAT TCCAGGGGTA CGACTGTGAG CCCACCTCAG AAGGGATCAG CCGTGCAACC
ACCAAGACCG TGGTCTATGC CTCGTTGGCA GTGCTGGGTC TGGACTTTAT TCTGACCGCC
TTGATGTTTG GAGATTTCTG A
 
Protein sequence
MMRRKSLLER VRLLGRSAID VLAVLGRSCL FLFHALVGRG GIGGGFQLLT KQLYSVGVLS 
LAIVVVSGVF IGMVLALQGY SILTKYGSEQ AVGQMVALTL LRELGPVVTA LLFAGRAGSA
LTAEIGNMKS TEQLSSLEMI GVDPLKYIVA PRLWAGFISL PLLALIFSVV GIWGGSWVAV
DWLGVYEGSF WANMQNSVSF TDDVLNGLVK SVVFAFVSTW IAVFQGYDCE PTSEGISRAT
TKTVVYASLA VLGLDFILTA LMFGDF