Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0959 |
Symbol | ttg2B |
ID | 1044875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1100618 |
End bp | 1101418 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637144354 |
Product | hypothetical protein |
Protein accession | NP_743120 |
Protein GI | 26987695 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATGCGCA GAAAATCCTT ACTCGAGCGT GTCCGCCTGC TGGGCCGCTC GGCAATCGAC GTGCTGGCCG TGCTCGGGCG TTCGTGCCTG TTCCTGTTCC ATGCGCTGGT CGGTCGCGGT GGTATTGGCG GCGGCTTCCA GCTGCTGACC AAGCAGTTGT ACTCGGTGGG TGTGCTGTCG CTGGCGATCG TCGTCGTGTC CGGTGTGTTC ATCGGCATGG TGCTGGCGCT GCAGGGCTAC AGCATCCTGA CCAAGTACGG CTCGGAGCAG GCGGTAGGGC AGATGGTCGC CCTGACCCTG CTGCGTGAAC TTGGCCCGGT GGTAACGGCG TTGCTGTTCG CCGGGCGTGC CGGTTCCGCG CTGACCGCCG AAATCGGCAA CATGAAGTCC ACCGAGCAGT TGTCGAGCCT GGAAATGATC GGTGTCGACC CGCTCAAGTA CATCGTTGCG CCACGCCTGT GGGCCGGTTT CATCTCGCTG CCGCTGCTGG CGCTGATCTT CAGCGTGGTC GGTATCTGGG GTGGCTCGTG GGTGGCGGTG GACTGGCTGG GTGTCTACGA GGGCTCGTTC TGGGCCAACA TGCAGAACAG TGTTTCTTTC ACTGACGACG TGCTCAACGG GCTGGTCAAG AGCGTGGTGT TTGCTTTCGT CTCGACCTGG ATCGCCGTAT TCCAGGGGTA CGACTGTGAG CCCACCTCAG AAGGGATCAG CCGTGCAACC ACCAAGACCG TGGTCTATGC CTCGTTGGCA GTGCTGGGTC TGGACTTTAT TCTGACCGCC TTGATGTTTG GAGATTTCTG A
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Protein sequence | MMRRKSLLER VRLLGRSAID VLAVLGRSCL FLFHALVGRG GIGGGFQLLT KQLYSVGVLS LAIVVVSGVF IGMVLALQGY SILTKYGSEQ AVGQMVALTL LRELGPVVTA LLFAGRAGSA LTAEIGNMKS TEQLSSLEMI GVDPLKYIVA PRLWAGFISL PLLALIFSVV GIWGGSWVAV DWLGVYEGSF WANMQNSVSF TDDVLNGLVK SVVFAFVSTW IAVFQGYDCE PTSEGISRAT TKTVVYASLA VLGLDFILTA LMFGDF
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