Gene PP_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0953 
Symbol 
ID1044868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1096234 
End bp1096959 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content61% 
IMG OID637144348 
ProductABC transporter ATP-binding protein 
Protein accessionNP_743114 
Protein GI26987689 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCC TCAAAGCCCA GCACCTGGCA AAGAGCTACA AGGGGCGGCA GGTAGTACGT 
GATGTCAGCC TGTCTATCGA CAGCGGCCAG ATCGTCGGCC TGCTCGGCCC CAACGGCGCC
GGCAAGACCA CTTGCTTCTA CATGATTGTC GGGCTGGTCC AGGCCGAACA GGGCCGGGTA
CTGATCGACA ACCTCGATGT CAGCCACCAG CCCATGCACG GCCGCGCCCG TGCCGGAATC
GGCTACCTGC CGCAGGAAGC CTCGATCTTC CGCAAGCTGT CGGTCGCCGA CAACATCATG
GCCATCCTCG AGACCCGCAA GGACCTCGAT CGGGACGGCC GCCGCAAAGA GCTGGAAAGC
CTGCTGCAGG AGTTCCACAT CAGCCACATC CGGGACAACC TCGGCATGAG CCTGTCTGGT
GGTGAACGCC GCCGCGTCGA AATTGCGCGC GCCCTGGCGA CCGCACCCAA GTTCATCCTG
CTGGACGAAC CGTTCGCCGG TGTCGACCCG ATTTCGGTCG GCGACATCAA GCAGATCATC
CACCACCTCA AGGCCAAAGG TATCGGCGTA CTGATTACCG ACCACAACGT GCGTGAAACC
CTGGACATCT GCGAAACCGC TTATATCGTC AACGATGGCC GACTGATCGC CGAAGGTGAC
GCTGAAACCA TCCTGGCAAA CGAACTGGTC AAAGAAGTTT ACCTGGGTCA CGAGTTCCGC
CTCTGA
 
Protein sequence
MATLKAQHLA KSYKGRQVVR DVSLSIDSGQ IVGLLGPNGA GKTTCFYMIV GLVQAEQGRV 
LIDNLDVSHQ PMHGRARAGI GYLPQEASIF RKLSVADNIM AILETRKDLD RDGRRKELES
LLQEFHISHI RDNLGMSLSG GERRRVEIAR ALATAPKFIL LDEPFAGVDP ISVGDIKQII
HHLKAKGIGV LITDHNVRET LDICETAYIV NDGRLIAEGD AETILANELV KEVYLGHEFR
L