| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0951 |
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| Symbol | rpoX |
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| ID | 1044866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1094177 |
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| End bp | 1094485 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637144346 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | NP_743112 |
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| Protein GI | 26987687 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.115791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGTCA ATATCAGTGG ACAGCATGTA GAAGTCACCC AGCCACTGCG CGATTACGTG
CTTGAAAAGC TCGCCCGCGT GGAGAGTCAC TTCGACAAGA TCACCAACGT GCAGGTAATC
ATGAAAGTCG AGAAGCTTCA GCAGAAGGTC GAGGCGACCC TGCAGATTCC CGGCGGCGAA
GTGGTAGCCA ACGCCGAACA CGAAGACATG TATGCAGCGA TCGACGCCTT GGCCGACAAG
CTCGACCGCC AACTGAAAAA ACACAAGGAA AAACAGCAAA GCCTGCTGCA AGGTGCAGCT
GCCCGCTGA
|
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| Protein sequence | MQVNISGQHV EVTQPLRDYV LEKLARVESH FDKITNVQVI MKVEKLQQKV EATLQIPGGE
VVANAEHEDM YAAIDALADK LDRQLKKHKE KQQSLLQGAA AR
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