| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0950 |
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| Symbol | ptsN |
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| ID | 1044865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1093700 |
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| End bp | 1094164 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637144345 |
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| Product | PTS IIA-like nitrogen-regulatory protein PtsN |
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| Protein accession | NP_743111 |
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| Protein GI | 26987686 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.740321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCGAC TTGAAACCAT CCTGACCCCC GGCCGTTCCC TCGTGAACGT GCCGGGAGGC
AGCAAGAAGC GCGCCCTGGA AAAGGTCGCC ACTGTCATCG CCGACCAAGT GCCAGAACTG
GAGATGCAGG ACGTCTTCGA AAAACTGGTA GCCCGGGAAA AGCTCGGTTC TACCGGTTTC
GGCAATGGCA TCGCCATCCC ACACTGCCGG CTTGAAGGAT GCTCCGCGCC AGTCAGCGCC
CTGCTGCACC TGGAAGCGCC TATCGATTAC GACGCCATCG ATGGCGCGCC GGTGGACCTG
CTGTTTGTGC TGCTGGTACC CGAAGCGGCC ACCGATGCCC ACCTTGAACT TCTGCGTCAG
ATCGCCAGCA TGCTCGATCG CAAGGAGGTC CGTGATCGAC TGCGTGCGGC CACCAGCAAC
GAGGCCCTGT TCCAGGTTGT CCTGGACGTA CAGAACGAGC ACTGA
|
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| Protein sequence | MIRLETILTP GRSLVNVPGG SKKRALEKVA TVIADQVPEL EMQDVFEKLV AREKLGSTGF
GNGIAIPHCR LEGCSAPVSA LLHLEAPIDY DAIDGAPVDL LFVLLVPEAA TDAHLELLRQ
IASMLDRKEV RDRLRAATSN EALFQVVLDV QNEH
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