| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0940 |
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| Symbol | tldD |
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| ID | 1044850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1085028 |
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| End bp | 1086467 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637144335 |
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| Product | tldD protein |
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| Protein accession | NP_743101 |
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| Protein GI | 26987676 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.262825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA TGTTATCCAC CGTCAGTGAG CAGCTCCTGG CCCCAGGCGG CTTGACCCTG
GACAGCCTGC AGAGCGTGCT GGGTGAGTTG GCTGGCCCCG GCATCGATGC CGCCGACCTG
TATTTCCAGG GCCAGATCTC GGAAACCTGG GCGCTGGAAG ACGGCATCGT CAAAGAGGGC
AGCTTCAACC TCGACCAGGG CGTGGGCGTG CGTGCCCAGT CCGGCGAAAA AACCGGCTTC
GCCTACAGCA ACGCGATCAA CCTCGAAGCG TTGACCTCGG CAGCCCGTGC CGCCCGTTCG
ATTTCCCGTG CCGGGCAAAA CGGCACGGTG CAAGCCTTCC GCAGCCAGGA AGTGGCCGCC
CTGTATACCG CGGACAATCC GCTGGACGTG CTCAGCCGTG CCGAAAAGGT CGAGCTGCTT
AAGCGTGTCG ATGCCGCCAC CCGTGCCCTG GACCCGCGCA TTCAGCAAGT CAGCGTGAGC
ATGGCCGGGG TCTGGGAACG CATTCTGATT GCCGCGGCCG ATGGCAGCCT GGCCGCCGAC
GTACGCCCGC TGGTGCGCTT CAATGTCAGT GTCATCGTCG AGCAGAATGG CCGTCGCGAA
CGTGGCGGAC AGGGCGGTGG CGGCCGTACC GACTACCGTT TCTTTACCGA AGAGCGGGTG
ATGGGCTATG CGCGCGAGGC CCTGCGCCAG GCCCTGGTGA ATCTTGAAGC GATCCCGGCA
CCGGCCGGTA CCTTGCCGGT GGTGCTGGGC TCGGGCTGGT CGGGCGTGCT GTTGCACGAA
GCGGTCGGCC ATGGCCTGGA AGGCGACTTC AACCGCAAGG GCAGTTCGGC GTTCAGTGGC
CGCATTGGCG AGAAGGTGGC GTCGAGCCTG TGCACCATCG TCGACGATGG CACCCTCGAA
GGCCGCCGCG GCTCGTTGAG CGTGGATGAC GAAGGCACCC CGACCGAATG CACCACGCTG
ATCGAGAATG GCGTGCTCAA GGGGTACATG CAGGACAAGC TGAACGCGCG CCTGATGGGC
ATGGCTGTGA CCGGCAACGG CCGCCGTGAA TCCTACGCGC ACCTGCCGAT GCCACGCATG
ACCAACACCT ACATGCGAGC CGGCGAAAGC GACCCACAGG AGATCATCGC GTCGGTGAAG
AAGGGTATCT ACTGCGCCAA CCTCGGTGGT GGACAGGTGG ATATCACCAG CGGCAAGTTC
GTGTTCTCCA CCAGTGAGGC CTACCTGATC GAAGACGGCA AGATTACCGC GCCAGTGAAG
GGCGCAACCC TGATCGGCAA TGGTCCCGAG GCGATGAGCC GGGTTTCGAT GGTCGGTAAC
GACCTGGCAC TGGACAGCGG GGTAGGAACG TGCGGAAAGG ACGGGCAGTC GGTGCCGGTC
GGGGTGGGGC AGCCTACCTT GAAACTGGAT GCGATTACCG TGGGCGGTAC CGGGGCTTGA
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| Protein sequence | MSQMLSTVSE QLLAPGGLTL DSLQSVLGEL AGPGIDAADL YFQGQISETW ALEDGIVKEG
SFNLDQGVGV RAQSGEKTGF AYSNAINLEA LTSAARAARS ISRAGQNGTV QAFRSQEVAA
LYTADNPLDV LSRAEKVELL KRVDAATRAL DPRIQQVSVS MAGVWERILI AAADGSLAAD
VRPLVRFNVS VIVEQNGRRE RGGQGGGGRT DYRFFTEERV MGYAREALRQ ALVNLEAIPA
PAGTLPVVLG SGWSGVLLHE AVGHGLEGDF NRKGSSAFSG RIGEKVASSL CTIVDDGTLE
GRRGSLSVDD EGTPTECTTL IENGVLKGYM QDKLNARLMG MAVTGNGRRE SYAHLPMPRM
TNTYMRAGES DPQEIIASVK KGIYCANLGG GQVDITSGKF VFSTSEAYLI EDGKITAPVK
GATLIGNGPE AMSRVSMVGN DLALDSGVGT CGKDGQSVPV GVGQPTLKLD AITVGGTGA
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