| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0938 |
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| Symbol | |
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| ID | 1044847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1080344 |
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| End bp | 1084165 |
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| Gene Length | 3822 bp |
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| Protein Length | 1273 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637144333 |
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| Product | hypothetical protein |
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| Protein accession | NP_743099 |
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| Protein GI | 26987674 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.349009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATGG GACGTCTGAA CCGCGTTCTT GTTGCTCTGA CCCGCTGGGG GTTGGGCATA
TGTGCCCTGC TGGCCGTATT GGTGGCGCTG TATGTCAGCC TTGGTCGTGA ACTGGTGCCG
CTGGTAGCCG AGTACCGTGC CGACGTAGAA AGCAAGGCCG AGCAGGCGCT GGGCCTGCCC
GTGCATGTCG GTGCCCTGGA AGGGCACTGG AGCGGACTGG CCCCTGTGCT GCGGGTGCGC
GACCTGCAAT TGGGCGAAGG CACCAAGGCG CTCCGGCTGG ATGACGTCAT GGTGGTGCCC
GACATCTGGG CCAGCCTCAC CGCCCGCGAA GTGCGCCTGG CGCGCATCCA GCTGGGCGGG
CTGCAACTGA TCCTTCGCGA GAACGAGCAG GGCGCCTGGA ACCTGGAAGG CCTGCCGAAG
AAGGACGACG CGCCGCTGGA CCCTGCCGAC TTGCTGCAGC GCCTGCGCCA GCTGGGGCGC
ATCGATGTGT TCGACAGTCT GGTCACCCTG CACCCCTGGC AGCGCGACCC GCTGACCCTG
ACATATGTGA GTGCCGGCCT GCAGGCCGGT GCTAAACGCC AGGCCCTGGA TTTGCGTGCG
ACCCTGCCTG ACGGCCAGCC CCTGGCGTTG AGCCTGAACA GCCGTATGTC GGCCGAGGCC
TGGCGTGATG GCGAGGTAGA AGCCTATGTG AGCCTGCCGC AAAGTGACTG GGCACATTGG
TTGCCGCCCA GGGTGTTGGG GCAGTGGCAT GCTGACACCC TGCGGGCGGG CGGTGAGTTC
TGGATCGGCT GGGGCAAGGG GCAGTTGCAA CGGGCCGTCG TAAGGCTCAA TGCACCCAGG
CTGGAGGGGG CCTATGCCGG GCGCAAGGCT GCCAACCTGA ATAATCTGGC TTTGGGCGCC
TGGTTCCAGC GCCGGGAGCA AGGCTTCGAT GTGGTCGTCG ACTCGTTGGC CATGGACCTC
GGCAAGGCCC GCTGGGAGTC TCACCTGCAG TTGCAGCAGC GCCCTGGCCA GAATGCAGCC
GATGAAAGCT GGCAGTTACA GGCCGACCGC CTCGACCTCA CCCCGCTGAC TCCGCTGATC
GATGCCCTCG CCCCCCTGTC GGACAAGGTC AAGGATGTGG TCGATGGCTT GAAGGTGACC
GGTGCGTTGC GCAATGTGCG CCTCGAGGCC AGGCCCAAGG CCGAGGGTGA CCAGCGGCTG
CAGTTCGCAG CCAACCTGGA GAAGGTAGGC TTCGATGCTT ATCACAACGC CCCGGCGGCC
GGTAACGTCA GTGGCAGCAT CAGTGGTGAC CTGGGCCACG GCGAACTGCG CCTGGATACC
GATGCGTTCA TGCTGCATCT GTACCCGATC TTCGCCAAGC CCTGGCATTA CCAGAAGGCG
AATGCGCGCT TGACCTGGAC CTTGGACAAA GACGGTTTCA CCCTGATTGC GCCCTACCTC
AAGGTGCTGG GCGAGGAGGG CAAGATCGCC GGTGACTTCC TGATTCGCCT GTTGTTCGAG
GAAGGCCGCG AGGACTACAT GGACCTGCGC GTCGGCCTGA CCGAAGGCGA TGGCCGCTAT
ACTGCCAAGT ATCTGCCCGA GGTGCTCAGC CCGGCCCTCG ACGAGTGGCT GCGCAGCGCT
ATCGTCAAAG GCGCTGTGGA TGAAGGCTAC TTCCAGTATC AGGGCTCGCT GAACCATGGC
GCATCCCCGC AAGCGCGCAG CATCAGCCTG TTCTTCAAGG TGCATGACGC CGCCCTGGAC
TTCCAGCCCG GTTGGCCACA GGTGCAGCAC GTCGATGGCG ATGTGTTCAT CGAGGACAGT
GGCGTGCGCA TCAAGGCTCA GCGAGGCGTG CTGCTCGACA CCAAGGTCAG CGATGTGAAT
GTCGATATCC CGCATGTCGA CGGCGACCAG CACAGCCATC TCTACCTGGA TGGCGACTTC
GACGGTAGCC TGGGTGATGG CCTGAAGATT CTCAAGGAAG CGCCAATCGG CACCGGGGAG
ATTTTCGCCG GCTGGGAAGG TGAGGGGCCG CTGAAGGGCA AGGTCAAGCT CGATATCCCG
CTGGCCCATG GGCAGCGCCC AAAGGTGCAG GTGGACTTCG CCACCCACGA TGCGCGCCTG
AAAGTTGCCC CGCCAAGCCT GGAGTTGAAC CGCCTGAAGG GCGACTTCAG CTTCGACTTC
GACAAGGGCC TGAGTGGCAA GGGCATCAGC CTGCAGGCCT TTGGCAAGCC GGTAACGGCG
CAAATAACCG CTGAAGGTCA GGCTGGGCAG ATGCAGACCC GCATCAATGC CAATGGCCAG
GTATCGCTCA AGACGCTGAC TGACTGGCTG CAGTTCAAGC AGGCCTTGCC GGCCTCCGGT
GACCTGCCCT ATCAGTTGCA GCTCAGTCTG GGGAGCCGGG ACAACCGCCT GAGTGTCACT
TCCAGCCTCA AGGGGCTGGC CATCGACCTG CCGGCTCCGT TCGGCAAAGC GGCAGCTGAT
ACCCGTGACA GCCGTTTCAG CATGAGCCTT CAGGGCCCGG AGCGGCAATT CGATGCTGCC
TACGCCGACC TTGCTCGCTT TGCCTATGCT GCACCGGCTG AAAACTTGAC CCAGGGCCGC
GGCGAGCTAG TGCTGGGCAC AGGCGACGCC CGGGTACCTG CCAGCCAGGG GCTGAGGGTG
CGCGGGCGCC TGGAGACCCT GGACCTGGCC CCTTGGCAAG AGCAGGCGGG CCGGCTGGCT
GGGGACGACC CCGGTGGCAG CGCGCGGCAG AACCTGCAAA GCGTCGACCT GAGCATCGGC
CAGTTGAAAG CCTTCGGCAT GGACCTGAAC CAGGCCGTGG TCCGCCTGGC CCGGGGCGGC
CCGGCCTGGG ATTTGCGCCT CGACAGCAAG GAAGTCATTG GTAATGCGCG CGTACCGGAT
GCCAAGGGCG CGCCCGTGGT CGTGCGCATG CAGACCTTGC GGCTGCCTGC CGCCAGCGCC
GCTGAACAGC AGGCTGAAGA CGGCCCCGAC CCGCTGGCCT CGTTCGATCC GCGCAAAGTC
CCGGCACTGG ACCTGAGCAT CGACAAGCTC TATCGCGGTG ACGATCTTTA CGGTAGTGCC
GCGATCAAGC TGCGGCCGAC CCCACGTGGC GTTACAGCCA GTGATATCGA CCTCGACCTC
AAGGGGTTGC GCATCGATGG CGGTGGTGGC TGGGAGGGGG AAACGGGTAA AACCAGCAGT
TGGTACAAAG GGCGCCTTGA CGGCAAGAAC CTGGCGGATG TGCTCAGCGC CTGGGGCTTT
GCCCCGACGG TGACCAGCCG CGACTTCCGC CTGGACGTGG ATGGCCGCTG GCCGGGTTCG
CCGGCCGCAG TGGGCCTGAA GCGCTTCTCG GGCAGCATGG ATGCGGCGCT GCGCACCGGC
CAGTTCGTCG AGGTCGAAGG CAGCGCACAG GCACTGCGGG TGTTCGGCCT GCTCAACTTC
AACTCGATTG GCCGGCGCCT GCGTCTGGAC TTTTCCGACC TGTTTGACAA GGGCCTGGCC
TATGACCGGG TCAAGGGCTT GCTGGTGGCC AGCAGTGGCG TGTACGTGAC CCGCGAACCG
ATTACTGTGA CCGGCCCGTC GAGCAACTTC GAGCTCGACG GCACGCTGGA CATGGTCAGC
GACCGGGTCG ATGCTGACTT GCAGGTGAGC CTGCCGGTGA CCAACAACCT GCCGCTGGCG
GCGTTGATCG TCGGCGCGCC GGCGGTGGGC GGTGCGCTGT TCCTGGTCGA TCGGCTGATC
GGTGACCGCG TGTCACGCTT TGCCAGCGTG CACTACCGTG TCGAAGGGCC GTGGAAAGAG
CCTAGAATCA CATTTGTGAA ACCTTTCGAG AAATCCCGCT AG
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| Protein sequence | MAMGRLNRVL VALTRWGLGI CALLAVLVAL YVSLGRELVP LVAEYRADVE SKAEQALGLP
VHVGALEGHW SGLAPVLRVR DLQLGEGTKA LRLDDVMVVP DIWASLTARE VRLARIQLGG
LQLILRENEQ GAWNLEGLPK KDDAPLDPAD LLQRLRQLGR IDVFDSLVTL HPWQRDPLTL
TYVSAGLQAG AKRQALDLRA TLPDGQPLAL SLNSRMSAEA WRDGEVEAYV SLPQSDWAHW
LPPRVLGQWH ADTLRAGGEF WIGWGKGQLQ RAVVRLNAPR LEGAYAGRKA ANLNNLALGA
WFQRREQGFD VVVDSLAMDL GKARWESHLQ LQQRPGQNAA DESWQLQADR LDLTPLTPLI
DALAPLSDKV KDVVDGLKVT GALRNVRLEA RPKAEGDQRL QFAANLEKVG FDAYHNAPAA
GNVSGSISGD LGHGELRLDT DAFMLHLYPI FAKPWHYQKA NARLTWTLDK DGFTLIAPYL
KVLGEEGKIA GDFLIRLLFE EGREDYMDLR VGLTEGDGRY TAKYLPEVLS PALDEWLRSA
IVKGAVDEGY FQYQGSLNHG ASPQARSISL FFKVHDAALD FQPGWPQVQH VDGDVFIEDS
GVRIKAQRGV LLDTKVSDVN VDIPHVDGDQ HSHLYLDGDF DGSLGDGLKI LKEAPIGTGE
IFAGWEGEGP LKGKVKLDIP LAHGQRPKVQ VDFATHDARL KVAPPSLELN RLKGDFSFDF
DKGLSGKGIS LQAFGKPVTA QITAEGQAGQ MQTRINANGQ VSLKTLTDWL QFKQALPASG
DLPYQLQLSL GSRDNRLSVT SSLKGLAIDL PAPFGKAAAD TRDSRFSMSL QGPERQFDAA
YADLARFAYA APAENLTQGR GELVLGTGDA RVPASQGLRV RGRLETLDLA PWQEQAGRLA
GDDPGGSARQ NLQSVDLSIG QLKAFGMDLN QAVVRLARGG PAWDLRLDSK EVIGNARVPD
AKGAPVVVRM QTLRLPAASA AEQQAEDGPD PLASFDPRKV PALDLSIDKL YRGDDLYGSA
AIKLRPTPRG VTASDIDLDL KGLRIDGGGG WEGETGKTSS WYKGRLDGKN LADVLSAWGF
APTVTSRDFR LDVDGRWPGS PAAVGLKRFS GSMDAALRTG QFVEVEGSAQ ALRVFGLLNF
NSIGRRLRLD FSDLFDKGLA YDRVKGLLVA SSGVYVTREP ITVTGPSSNF ELDGTLDMVS
DRVDADLQVS LPVTNNLPLA ALIVGAPAVG GALFLVDRLI GDRVSRFASV HYRVEGPWKE
PRITFVKPFE KSR
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