Gene PP_0900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0900 
Symbol 
ID1044789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1040604 
End bp1041332 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content62% 
IMG OID637144295 
ProductPAP2 family protein 
Protein accessionNP_743061 
Protein GI26987636 
COG category[R] General function prediction only 
COG ID[COG3907] PAP2 (acid phosphatase) superfamily protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAC GCACCCGCCC TCGCCCGATC AACTACTGGC TGTACCTGGG GATTCCCCTG 
GCGACTGCGG TGGCCTTGAT CCTGCTGGAG CTGACTTCAG TCGACATGGA TGTCGCCAAC
CTGTTCTTCG ACCCCGCTGC CGGGCAGTTC ATTGGCCGCC ACAGTTACCT GTTGGAAAAC
ATCCTGCATG ACCGGGTCAA GCAAGTGGTG ATCCTGTTGG GGGTGATATC GCTGCTGACC
TTTGCCGCGA GCTTTTTCTG GAAGCGCCTG TTTGGCTGGC GCCGTGAACT GGGCTGCCTG
GTGCTGGCAC TGGGCTTGTC CACGGCGTTT GTCACGCCGC TGAAAAAAGT CACCCAGGTG
CAGTGCCCTT GGAGCCTGAC CCAGTTTGGC GGCACCGAAA CCTACAGCAA GCTGCTGGAG
CCACGGCCGC CTACCGACAA GCCTGGGCTG TGCTGGCCGG GCGGGCATGC AGCGACCGGT
TTCTGCCTGT TCGCCTTGTT CTTCCTGCTG CGTGATCGCA AGCCACGCCT GGCGCGAGTG
GCATTTGTAG TGGCCTTGAC AGCAGGGTCG ATACTGTCGG TGGGCAGGAT GATGCAGGGG
GCGCACTTCC TGTCGCACAA TGTGTGGACG GCAGTGTTCT GCTGGTTGAT CGGATTGGGG
TCGTATTACC TGGTTCTCTA TCGGCGGGGG CTGGCCGAGG TGCCCGTCGC CGAGCGCAGC
GCCGCATGA
 
Protein sequence
MQQRTRPRPI NYWLYLGIPL ATAVALILLE LTSVDMDVAN LFFDPAAGQF IGRHSYLLEN 
ILHDRVKQVV ILLGVISLLT FAASFFWKRL FGWRRELGCL VLALGLSTAF VTPLKKVTQV
QCPWSLTQFG GTETYSKLLE PRPPTDKPGL CWPGGHAATG FCLFALFFLL RDRKPRLARV
AFVVALTAGS ILSVGRMMQG AHFLSHNVWT AVFCWLIGLG SYYLVLYRRG LAEVPVAERS
AA