| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0897 |
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| Symbol | |
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| ID | 1044785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1037869 |
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| End bp | 1039392 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637144292 |
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| Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit |
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| Protein accession | NP_743058 |
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| Protein GI | 26987633 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.728674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGA TCAAGCAAGA CGACCTGATT CAGAGCGTCG CCGACGCCCT GCAATTCATC
TCGTACTACC ACCCCGTCGA TTTCATCCAG GCCATGCACG AGGCCTATCT GCGTGAGGAA
TCGCCTGCTG CACGCGATTC CATCGCCCAG ATCCTGATCA ACTCGCGCAT GTGCGCCACC
GGCCATCGTC CAATCTGCCA GGACACCGGT ATCGTCACCG TGTTCATCCG CGTGGGCATG
GACGTGCGCT GGGATGGCGC CACCATGAGC GTCGACGACA TGATCAACGA AGGTGTGCGT
CGCGCCTACA ACCTGCCTGA AAACGTCCTG CGCGCTTCGA TCCTGGCCGA CCCGGCCGGT
GCCCGCAAGA ACACCAAGGA CAACACCCCG GCAGTGATCC ACTACTCCAT AGTCCCCGGC
GACAAGGTGG AAGTCGATGT CGCAGCCAAG GGCGGCGGCT CGGAAAACAA GTCGAAGATG
GCCATGCTCA ACCCGTCCGA CTCGATCGTC GACTGGGTAC TGAAGACCGT GCCGACCATG
GGTGCTGGCT GGTGCCCGCC TGGCATGCTC GGCATCGGCA TCGGCGGTAC CGCCGAGAAG
GCCGCGGTCA TGGCCAAGGA AGTGTTGATG GAGTCCATCG ACATTCACGA ACTGAAAGCC
CGTGGCCCAC AGAACCGCCT GGAAGAAATC CGCCTGGAGC TGTTCGACAA GGTCAACCAG
CTGGGCATCG GCGCCCAGGG CCTGGGTGGC CTGACCACCG TGCTCGACGT CAAGATCATG
GACTACCCGA CCCACGCCGC GTCCTTGCCG GTGTGCATGA TCCCCAACTG CGCTGCTACC
CGCCACGCCC ACTTCGTGCT CGATGGCACC GGCCCGGCAG AACTGGAAGC GCCGTCGCTG
GACGCTTACC CGGAAATCGT CTGGGAAGCC GGCCCGAGCG CCCGTCGCGT CAACCTCGAC
GACATCACCC CGGAAGAAGT GGCCAGCTGG AAGCCGGGCG AAACCATCCT GCTCAACGGC
AAGATGCTGA CCGGCCGTGA TGCCGCGCAC AAGCGCATGG TTGAAATGCT CAACCGTGGC
GAAGAGTTGC CGGTAGACCT GAAAGGCCGC TTCATCTACT ACGTCGGCCC GGTCGACCCG
GTGGGTGACG AAGTGGTAGG CCCAGCCGGC CCGACCACTG CTACCCGTAT GGACAAGTTC
ACTCGCCAGA TCCTTGAGCA GACTGGCCTG CTGGGCATGA TTGGCAAGTC CGAGCGTGGC
CCGACCGCCA TCGAGGCGAT CAAGGACAAC AAGGCCGTGT ACCTGATGGC CGTTGGCGGC
GCTGCCTACC TGGTCGCCCA GGCCATCCGC AAGTCGAAGG TACTGGCCTT CGCCGAGCTG
GGCATGGAAG CGATCTACGA GTTCGAAGTC AAGGACATGC CGGTGACCGT CGCCGTGGAC
AGCAACGGTG AATCGGTACA CATCACTGGC CCTGCCCTGT GGCAGAGCAA GATTGCCGAA
AGCCTGGCCG TCGAAGTGAA GTAA
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| Protein sequence | MTVIKQDDLI QSVADALQFI SYYHPVDFIQ AMHEAYLREE SPAARDSIAQ ILINSRMCAT
GHRPICQDTG IVTVFIRVGM DVRWDGATMS VDDMINEGVR RAYNLPENVL RASILADPAG
ARKNTKDNTP AVIHYSIVPG DKVEVDVAAK GGGSENKSKM AMLNPSDSIV DWVLKTVPTM
GAGWCPPGML GIGIGGTAEK AAVMAKEVLM ESIDIHELKA RGPQNRLEEI RLELFDKVNQ
LGIGAQGLGG LTTVLDVKIM DYPTHAASLP VCMIPNCAAT RHAHFVLDGT GPAELEAPSL
DAYPEIVWEA GPSARRVNLD DITPEEVASW KPGETILLNG KMLTGRDAAH KRMVEMLNRG
EELPVDLKGR FIYYVGPVDP VGDEVVGPAG PTTATRMDKF TRQILEQTGL LGMIGKSERG
PTAIEAIKDN KAVYLMAVGG AAYLVAQAIR KSKVLAFAEL GMEAIYEFEV KDMPVTVAVD
SNGESVHITG PALWQSKIAE SLAVEVK
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