| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0886 |
|---|
| Symbol | |
|---|
| ID | 1044772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 1029118 |
|---|
| End bp | 1029834 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637144281 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_743047 |
|---|
| Protein GI | 26987622 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3471] Predicted periplasmic/secreted protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATCC CACGTCGCGG CGCCGCCCTG ATCATGTCTT GCGGCCTGCT CGCCAGCCTG
CCGGCACTGG CTGCCGATGA ACCGCGTTTC AACCAGGTAT CGCTGCGTGC CGAAGTCAGC
AAGGAAGTGG CGCGCGACCT GATGGTCGTG ACCCTGTACA GCGAAGCGCA GAACAGCGAC
CCGGGCAAGC TCGCCAAGCA GATTACCGAA ACCATGAACA AGGCCGTGCA GCAGTCGCGC
CAGGTCAAGG ACGTGAAGAT CAGCCAAGGC AGCCGCAACA GCTACCCGGT GTATGACAGC
AAGGGCCAGA AAATTACCGG CTGGCGCGAG CGCGCCGAAC TGCGCCTTGA AAGCGCCAAC
TTCCCGGCCT TGTCCCAGCT TACCGCCGAT TTGTTGCAAG AGCTGAAAAT GGCTGGCATG
GACTTTTCCA TCGCCCCGGC CACGCGCAAG GCCAGCGAGG ATGCTCTGCT CAAGGATGCG
GTCGATGCCT TCAAGGCACG CGCGCAACTG GCGACCGAAG CGCTGGGTGG CAAAGGCTAC
AAAGTGGTGA GCCTGAACCT CAACAGCAGC GGCTACCCGC GCCCGTACTT GCGTAGCGCG
CCGATGGCGA TGAAGGCCAT GGGGGCTGAT GAAGCAGCAC CGGCGCCAGA TATCGAGGCA
GGCACCAGTG AAGTGAGCAT GAATGCCGAT GGCCTGATCG AAGTGCAGAT GCCATAA
|
|---|
| Protein sequence | MQIPRRGAAL IMSCGLLASL PALAADEPRF NQVSLRAEVS KEVARDLMVV TLYSEAQNSD
PGKLAKQITE TMNKAVQQSR QVKDVKISQG SRNSYPVYDS KGQKITGWRE RAELRLESAN
FPALSQLTAD LLQELKMAGM DFSIAPATRK ASEDALLKDA VDAFKARAQL ATEALGGKGY
KVVSLNLNSS GYPRPYLRSA PMAMKAMGAD EAAPAPDIEA GTSEVSMNAD GLIEVQMP
|
|---|
| |