| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0885 |
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| Symbol | |
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| ID | 1044770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1027112 |
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| End bp | 1028737 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637144280 |
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| Product | dipeptide ABC transporter, periplasmic peptide-binding protein |
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| Protein accession | NP_743046 |
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| Protein GI | 26987621 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.575043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAC ACGCAGTCAT TCCGTTCCTG CTGGGTGCAG GCTTGCTCAG CGGCGCACCG
TCGGCCGTTG CCGCATCCAA CCTGGTGTTC TGCTCCGAAG GCAGCCCGGC CGGCTTCGAT
CCGGGGCAGT ACACCACCGG GACCGACTTC GATGCCTCGG CAGAGACCGT GTTCAACCGC
CTGACCCAGT TCGAGCGCGG CGGCACTGCG GTCATCCCGG GCCTGGCGAC CAAATGGGAA
GTGTCCGACG ACGGCAAGAC CTACACCTTC CACCTGCGCG AAGGGGTCAA GTTCCACACC
ACCGACTACT TCAAGCCCAG TCGCCCGTTC AACGCCGACG ACGTGCTGTT CACCTTCAAC
CGCATGCTCG ACAAGGACAA CCCGTTCCGC AAGGCGTACC CCACCGAGTT TCCATACTTC
ACCGACATGG GCATGGACAA GAACATTGCC AAGGTGGAGA AGCTTGACGA GCACACGGTG
AAGTTCACCC TCAACGAGGT TGACGCCGCG TTCATCCAGA ACCTGGCCAT GAGCTTTGCC
TCGATCCAGT CCGCCGAATA CGCCGACCAG CTCCTAAAGA ACGGCAAGGC CGCCGACATC
AACCAGAAGC CGATCGGCAC CGGCCCGTTC GTGTTCAGCA AATACCAGAA GGACGCGCAG
ATCCGCTTCA AGGGCAACAA GGACTACTGG CAGCCCGAGG ACGTGAAGAT CGACAACCTG
ATCTTTGCCA TCACCACCGA CGCCTCGGTG CGCATGCAGA AGCTCAAGAA GAACGAGTGC
CAGGTCACCC TGTTCCCACG CCCGGCCGAC ATCGAGCCGC TAAAAGCCGA CAAGAACCTG
CAAATGCCGC AGCAGGCCGG TTTCAACCTC GGCTATATCG CCTACAACGT GATGGACAAG
ATCAAGGGCA GCAACGAGGC CAACCCCATG GCCCAGCTGA AAGTCCGACA GGCGCTGGAC
ATGGCCGTGG ACAAGAAAAA GATCATCGAG TCGGTGTACC AGGGCGCCGG CCAGCTGGCG
GTCAACGCCA TGCCGCCCAC GCAGTGGTCC TATGACGACA GCATCAAGGA CGCCGCCTTT
GACCCCGAGA AAGCCAAGCA ACTGCTCAAG GAAGCCGGCA TCAAGGAAGG CACCGAAATC
ACCCTGTGGG CCATGCCCGT GCAACGCCCG TACAACCCCA ATGCCAAACT GATGGCTGAA
ATGCTCCAGT CCGACTGGGC CAAGATCGGT ATCAAGGCGA AGATCGTCAG TTATGAATGG
GGCGAGTACA TCAAGCGCTC CAAAGGTGGC GAACAGGGTG CCATGCTGAT TGGCTGGAGC
GGTGACAATG GTGACCCGGA CAACTGGCTG GGTACCCTCT ACGGTTGCGA TGCCGTCGAT
GGCAACAACT TCTCCAAGTG GTGCTACAAG CCCTACGACG ACCTGATCAA GCAGGCCAAG
GCCACGTCCG ACCAGGCCAA GCGCACCGAG CTGTACCAGA AGGCGCAGCA TATACTCAAG
GAGCAGGTAC CGATCACCCC GATCGCCCAC TCCACTGTCT ACCAGCCCAT GAGCGCCAAG
GTGAAGGACT TCAAGATCAG CCCGTTCGCG CTGAATTCCT TCTACGGCGT CAGCGTGGAC
AAATAG
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| Protein sequence | MLKHAVIPFL LGAGLLSGAP SAVAASNLVF CSEGSPAGFD PGQYTTGTDF DASAETVFNR
LTQFERGGTA VIPGLATKWE VSDDGKTYTF HLREGVKFHT TDYFKPSRPF NADDVLFTFN
RMLDKDNPFR KAYPTEFPYF TDMGMDKNIA KVEKLDEHTV KFTLNEVDAA FIQNLAMSFA
SIQSAEYADQ LLKNGKAADI NQKPIGTGPF VFSKYQKDAQ IRFKGNKDYW QPEDVKIDNL
IFAITTDASV RMQKLKKNEC QVTLFPRPAD IEPLKADKNL QMPQQAGFNL GYIAYNVMDK
IKGSNEANPM AQLKVRQALD MAVDKKKIIE SVYQGAGQLA VNAMPPTQWS YDDSIKDAAF
DPEKAKQLLK EAGIKEGTEI TLWAMPVQRP YNPNAKLMAE MLQSDWAKIG IKAKIVSYEW
GEYIKRSKGG EQGAMLIGWS GDNGDPDNWL GTLYGCDAVD GNNFSKWCYK PYDDLIKQAK
ATSDQAKRTE LYQKAQHILK EQVPITPIAH STVYQPMSAK VKDFKISPFA LNSFYGVSVD
K
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