| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0883 |
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| Symbol | |
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| ID | 1044767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1023765 |
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| End bp | 1025144 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637144278 |
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| Product | outer membrane porin |
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| Protein accession | NP_743044 |
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| Protein GI | 26987619 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.269158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGTAT TCACCTTGAC CGCACTGGCG TTATCCATCA GTGCCTTTTC CACGGTGGCC
CAGGCAGATC CGCAGAGCCA GGACTACCTC CCGCTCACCC TCAAAAGCAG CAGCGAGCAA
GCGCAAGCCA GCGGCTTCAT CGACGGCCAA AGCCTGTCCG GTAGCACCCG CAACTGGTAT
GCCCGCGAAC GTGCCGCACG CGCGCCGCTG TGGAAGTACT ACAAGAACGA CGGCACCCGC
CACGACACCC ACAGCCGTGA AAACTGGGTC CAGGGCACCA TCCTCAATTA CAGCTCCGGC
TTCACCCAGG GCACCGTGGG CTTCGCCGTC GAGGCTGCCG GCTACAACGC CATCGCCCTG
CAGCAGAGCC GCGAAGCCAT CGCCGGCCCC AACAACCGCA CCCTCACCCA CAGCGATGGC
GACCCCGTCG GCCAGTGGAG CAAACTGGGC CTGGGCAATA TCAAGGCGCG CGTGTCCAAC
ACCACCCTTA CCCTTGGCCG CCAGTCGGTG GACACGCCGA TGATCGCCTA CATCGGCAAC
CGCGCCCTGC CCTCGAGCTT CCAGGGCGCG TTCCTGCACA GCGCTGAATT CGACAACCTC
AGCATCGACC TGGGCACCTT CGACCGCGTC TCGCCACGTA CCGAACAGAG CCTCAGCAAG
TTCCGCAGCG AGTACAGCGC CACCGGCGTG GAAACCGACC GTGCCAGCAC CGCCGGCATC
AACTACCAGC CGTTCAAGAG CCTGAGTACC AGCCTGTACG CCACCAAGGT CGAGGACTTC
TGGAACCAGT ACTACTTCGG CGCCAACCAT GTGCTCGGCG ACAGCGCAGT GCTCAGCCTG
AGCACCGGCC TGAACTACTA CAAGACCGTC GACGCCGGCA GCCAGAAAAT GGGCAAGATC
GACAACGACA CTTACAGCCT GTCACTGGGC CTGACCCATC AAGCCCACAC CCTCAGCGCC
TCCTGGCAGC AGGTCAACGG CAATGAGTAC TTCGACTACC TGCACGAAAC CAACGGCATC
TTCCTGGCCA ACTCGCTGCT GTCGGACTTC AACGGCCCCA ACGAGAAATC GCTGCAGCTT
TCCTATGTGC TGAACATGGC GCCCTATGGC GTGCCTGGCC TGAAGTTCAA CCTGTACAAC
GCCCGCGGCT GGGGTATCGA CGGCACCCAC TACCGCGGCA CTGCCTACGA CGTGAATGGC
CTGGATGGCG AAACCCACTA TGAGTGGGGT ATCGGCACCA GCTACGCGTT GCAGAGCGGG
CCGCTGAAAG ACACCAGCAT CCGCGCCACC TACACCACCC ATCGCGCCAG CAAGGCCCAG
GGCGATGGCA GCCTGGATGA GTTCCGCGTG GTCACCACCA TTCCGTTCAA CATTCTCTGA
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| Protein sequence | MKVFTLTALA LSISAFSTVA QADPQSQDYL PLTLKSSSEQ AQASGFIDGQ SLSGSTRNWY
ARERAARAPL WKYYKNDGTR HDTHSRENWV QGTILNYSSG FTQGTVGFAV EAAGYNAIAL
QQSREAIAGP NNRTLTHSDG DPVGQWSKLG LGNIKARVSN TTLTLGRQSV DTPMIAYIGN
RALPSSFQGA FLHSAEFDNL SIDLGTFDRV SPRTEQSLSK FRSEYSATGV ETDRASTAGI
NYQPFKSLST SLYATKVEDF WNQYYFGANH VLGDSAVLSL STGLNYYKTV DAGSQKMGKI
DNDTYSLSLG LTHQAHTLSA SWQQVNGNEY FDYLHETNGI FLANSLLSDF NGPNEKSLQL
SYVLNMAPYG VPGLKFNLYN ARGWGIDGTH YRGTAYDVNG LDGETHYEWG IGTSYALQSG
PLKDTSIRAT YTTHRASKAQ GDGSLDEFRV VTTIPFNIL
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