Gene PP_0881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0881 
SymboldppB 
ID1044762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1020974 
End bp1021984 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content63% 
IMG OID637144276 
Productalkaline phosphatase 
Protein accessionNP_743042 
Protein GI26987617 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGTT TTATTGCCCG GCGCCTTGGC CTGCTGATAC CGACCTTTTT CGGCATCACC 
TTGCTGACCT TCGCGCTCAT ACGCCTGATC CCCGGCGACC CGGTGGAAGT GATGATGGGC
GAGCGCAGGG TCGACCCCGA AATGCATGCC CAGGCCATGG AACGCCTGGG CCTGAACAAG
CCACTGCCGG TCCAGTACCT GGACTACGTC GGCAAACTTG CCCAGGGTGA CCTTGGCGAA
TCGCTGCGCA CCCGCGAAAG CGTGTGGCGC GAGTTCCTCA CCCTGTTCCC GGCCACCCTG
GAACTGGCCT TCGCCGCCCT GCTGTTCGCC GGCGTCGTCG GCCTGCTGGC CGGTGTAATC
GCCGCACTCA AGCGCGGTTC GCTGTTCGAC CACGGGGTCA TGGGCATATC ACTGGCCGGC
TACTCGATGC CGATTTTCTG GTGGGGCCTG ATCCTGATCA TGTTCTTCTC CGTGAGCCTG
GGCTGGACCC CGGTTTCCGG GCGCATCGAC CTGCTCTACG ACATCGAGCC GAAGACCGGC
TTCATGCTTA TCGACACCCT GCTCAGCGAT GAAGAAGGCG CGTTCAAGGA CGCTGTGATG
CACCTGATCC TGCCGGCCAT CGTGCTCGGC ACCATCCCGC TGGCAGTGAT CGCCCGCATG
ACCCGCTCGT CGATGCTTGA AGTACTGCGC GAAGACTACA TCCGCACCGC CCGCGCCAAA
GGCCTGTCGC CGGCCCGTGT GGTGTTCGTC CATGGCCTGC GCAATGCGCT GATCCCGGTG
CTGACCGTGT TCGGCCTGCA GGTCGGCACG CTGCTGGCCG GTGCGGTGCT GACCGAAACC
ATCTTTTCCT GGCCGGGCAT CGGCAAATGG CTGATCGAAG CCATCGGTGC CCGTGACTAC
CCCGTGGTCC AGAACGGCAT CCTGTTGATC GCCTGCCTGG TGATTCTGGT CAACTTCGTC
GTGGACATCC TCTACGGCCT GGCCAACCCA CGCATCCGTC ATCAGCGCTG A
 
Protein sequence
MLSFIARRLG LLIPTFFGIT LLTFALIRLI PGDPVEVMMG ERRVDPEMHA QAMERLGLNK 
PLPVQYLDYV GKLAQGDLGE SLRTRESVWR EFLTLFPATL ELAFAALLFA GVVGLLAGVI
AALKRGSLFD HGVMGISLAG YSMPIFWWGL ILIMFFSVSL GWTPVSGRID LLYDIEPKTG
FMLIDTLLSD EEGAFKDAVM HLILPAIVLG TIPLAVIARM TRSSMLEVLR EDYIRTARAK
GLSPARVVFV HGLRNALIPV LTVFGLQVGT LLAGAVLTET IFSWPGIGKW LIEAIGARDY
PVVQNGILLI ACLVILVNFV VDILYGLANP RIRHQR