| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0872 |
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| Symbol | prfC |
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| ID | 1044749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1011587 |
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| End bp | 1013170 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637144267 |
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| Product | peptide chain release factor 3 |
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| Protein accession | NP_743033 |
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| Protein GI | 26987608 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.126869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACC AGGCCGCCGA AGTCGCGAAG CGCCGCACTT TCGCAATCAT TTCCCACCCC
GACGCCGGTA AGACCACCAT CACCGAGAAG CTGCTGCTGA TGGGCAAGGC CATTGCCGTC
GCCGGTACCG TGAAGTCGCG CAAGTCCGAC CGCCACGCCA CCTCCGACTG GATGGAAATG
GAGAAGCAGC GCGGCATCTC CATCACCACC TCGGTGATGC AGTTCCCGTA CCGCGAGCAC
ATGATCAACC TGCTCGACAC CCCCGGCCAC GAAGACTTCT CGGAAGACAC CTACCGCACC
CTGACCGCGG TGGACTCGGC GCTGATGGTG CTCGACGGCG GTAAAGGTGT AGAGCCGCGT
ACCATCGCCC TGATGGACGT GTGCCGCCTG CGCGACACGC CCATCGTCAG CTTCATCAAC
AAACTCGACC GAGACATCCG CGACCCGATC GAACTGCTCG ACGAGATCGA AGCCGTTTTG
AAGATCAAGG CCGCGCCAAT CACCTGGCCG ATCGGTTGCT ACCGCGACTT CAAGGGCGTG
TACCACCTGA CCGGTGACTA CATCGTGGTG TACACCCCGG GCCACGGCCA CGAGCGCACC
GAAGCCAAGA TCATCCAGAA GCTGGACTCG GACGAAGCCC GCGCGCACCT GGGCGACCAG
TACGATTCGT TCGTCGAGCA ACTGGAGCTG GTGCAGGGCG CTTGCCACGA GTTCAACCAG
GAAGAGTTCA TCAACGGTCA GCTGACCCCT GTGTTCTTCG GTACTGCACT GGGCAACTTC
GGTGTCGACC ACGTGCTCGA CGCCGTGGTC GACTGGGCGC CGCGTCCGCT TGGCCGTGTG
GCCCACGAGC GCACCGTGGA GCCTGTGGAA GAGAAGTTCA CAGGCTTCGT GTTCAAGATC
CAGGCGAACA TGGACCCGAA ACACCGTGAC CGTATCGCCT TCATGCGCAT CTGCTCGGGC
AAGTACGAGA AAGGCATGAA AATGCGCCAC GTGCGCCTGA ACAAAGACCT GCGTATCGGC
GATGCGCTGA CGTTCTTCTC CTCCGAGCGT GAGCAGCTGG AAGAAGCCTT TGCCGGTGAC
ATCATCGGCC TGCACAACCA CGGCACCATC CAGATCGGCG ACACCTTCAC CGAAGGCGAA
GCGCTGGGCT TCACCGGTAT CCCGCACTTC GCGCCGGAGC TGTTCCGCCG CGTACGCCTG
AAAGACCCGC TGAAATCCAA GCAACTGCGT CAAGGCCTGC AGCAGCTGGC CGAAGAAGGT
GCTACTCAGG TGTTCTTCCC TGAGCGCAGC AACGACATCA TCCTGGGTGC GGTCGGTGTG
CTGCAGTTTG ACGTGGTCGC CAGCCGCTTG AAGGAAGAGT ACAAGGTGGA GTGTGCCTAC
GAGCCTATCA CCGTCTGGTC GGCGCGCTGG ATCAGTTGCG ATGACAAGAA GAAGCTCGAG
GAATTCCAGA CCAAGGCCAT GGAAAACTTG GCCATCGACG GCGGCGGTCA CCTGACCTAC
CTGGCGCCGA CCCGGGTCAA CCTGGCGCTG ATGGAAGAGC GCTGGCCGGA CATCAAGTTC
CGCGCTACCC GCGAGCACCA TTAA
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| Protein sequence | MTNQAAEVAK RRTFAIISHP DAGKTTITEK LLLMGKAIAV AGTVKSRKSD RHATSDWMEM
EKQRGISITT SVMQFPYREH MINLLDTPGH EDFSEDTYRT LTAVDSALMV LDGGKGVEPR
TIALMDVCRL RDTPIVSFIN KLDRDIRDPI ELLDEIEAVL KIKAAPITWP IGCYRDFKGV
YHLTGDYIVV YTPGHGHERT EAKIIQKLDS DEARAHLGDQ YDSFVEQLEL VQGACHEFNQ
EEFINGQLTP VFFGTALGNF GVDHVLDAVV DWAPRPLGRV AHERTVEPVE EKFTGFVFKI
QANMDPKHRD RIAFMRICSG KYEKGMKMRH VRLNKDLRIG DALTFFSSER EQLEEAFAGD
IIGLHNHGTI QIGDTFTEGE ALGFTGIPHF APELFRRVRL KDPLKSKQLR QGLQQLAEEG
ATQVFFPERS NDIILGAVGV LQFDVVASRL KEEYKVECAY EPITVWSARW ISCDDKKKLE
EFQTKAMENL AIDGGGHLTY LAPTRVNLAL MEERWPDIKF RATREHH
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