| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0870 |
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| Symbol | |
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| ID | 1044747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1009392 |
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| End bp | 1010333 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637144265 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | NP_743031 |
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| Protein GI | 26987606 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.94223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCTGGC CCAATAAGGA TAGGAAACGC ATGAAGAAGA GAATCGCCTT GCTGCTGGGC
GCGGCCCTGC TGTTCGCAGG ATTTGCCCAG GCAGCGGAAA AACCGCTGAT CCGCATCGGC
GCGCGGGTGT TCACCGAACA GACCGTGCTC GCCGAAATCA CCGCGCAGTA CCTGCGCGCC
AATGGCTTCG ATGTGCGTGT CATCGGCGGG CTTGGCAGCA GCCTCGCACG TCAGGCCCAG
GAAACCGGCC AGCTCGACCT GATGTGGGAA TACACCGGGG TGTCGCTGGT GTCCTACAAC
CACATCGATG AGCGTATGCC CAGCGCCGAG GCCACTTACG CCAAGGTCAA GGAGCTGGAT
GCCAAAAAAG ACCTGATCTG GCTGACCCCG TCGAAATTCA GCAACACCTA TGCCCTCGGC
TTGCCGAAGC AGGTCGCCGA GGCCTACCCG CAGATCAACT CGATCAGCGA CCTCAACCAG
GTGCTGCGCG ACGAGCGCAA GCGTAATCAC CTGGTGGCTC TGGACACCGA GTTCGCCAAC
CGCCCCGACG GCCTGGTCGG GCTCAAGGAA ATGTACGACC TGCAGGTCGG CCGCGCCAAC
ATCCGCCAGA TGGACGCGGG CCTGGTCTAC ACGGCCATGC ACAACAACCA GGTGTTCGCA
GGCCTGGTCT ACACCACCGA CGGTCGCCTG AGCGCGTTCA ACCTCAAGCT GCTCGAAGAC
GACAAGCACT ACTTCCCCGA CTACACCGCC GCCCCGGTGG TGCGCAAGGC CGTGCTCGAC
GCCAACCCGC AACTGGTCGC CCTGCTCAAG CCACTGGCCG AGCAGCTCGA TGACGAGACC
ATGCGCCAGC TCAATGCCAA GGTTGACGTA GACCACCAGA ACCCGACCGC AGTGGCCGCC
GCATTCCTGC GAGAGCATCC CCTCAAGGAG GTACAGCCAT GA
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| Protein sequence | MAWPNKDRKR MKKRIALLLG AALLFAGFAQ AAEKPLIRIG ARVFTEQTVL AEITAQYLRA
NGFDVRVIGG LGSSLARQAQ ETGQLDLMWE YTGVSLVSYN HIDERMPSAE ATYAKVKELD
AKKDLIWLTP SKFSNTYALG LPKQVAEAYP QINSISDLNQ VLRDERKRNH LVALDTEFAN
RPDGLVGLKE MYDLQVGRAN IRQMDAGLVY TAMHNNQVFA GLVYTTDGRL SAFNLKLLED
DKHYFPDYTA APVVRKAVLD ANPQLVALLK PLAEQLDDET MRQLNAKVDV DHQNPTAVAA
AFLREHPLKE VQP
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