Gene PP_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0856 
Symbol 
ID1044724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp990118 
End bp991260 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content63% 
IMG OID637144251 
Producthypothetical protein 
Protein accessionNP_743017 
Protein GI26987592 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID[TIGR03300] outer membrane assembly lipoprotein YfgL 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGTT GGAAACATGC AGCAGTGCTG ACCCTGGCCG TACTGGCCGC AGGTTGCAGC 
AGCAACAGCA AGAAGGAACT GCCCCCGGCC GAGCTGACCA AGTTCACCGA GGAAGTGGTG
CTGAAGAAGC AGTGGAGCCG TTCGATCGGT GACGGCCAGG GTGAAACCTA CAACACCTTG
GTACCGGCCA TCGAGAACGA CCGTATCTAC GCTTCCGACG TCAACGGCGA AGTCTTCGCC
CTCGACCGCA TCACCGGTGA CGTGGTGTGG AAGAAGGACC TGGAGCTGCA GGTTTCCGGT
GCAGTTGGCG TAGGCTATGG CCTGGTCATG CTCGGTACCC TCAAGGGTGA AGTCATTGCC
CTGGACTCCA GCACCGGTGA GGAGCGTTGG CGCTCGCGCG TGACCAGCGA AGTGCTGGCC
CCACCTGCCA ACAACGGTGA CGTGGTGGTG GTGCAGACCC AGGACGATCG CCTGATCGGC
CTGGATGCCG CCACTGGCGA CCGCCGTTGG ATCTACGAAA ACTCGCCGGC CGTGCTGACG
CTGCGTGGCA CCGGTGCGCC GATCGCCACC AACCGCCTGG CGGTTGCCGG CCTGTCTACC
GGCAAGGTAG TGGCGGTGGA CATCAACAAC GGTGTGCCGG TGTGGGAGAG CCGCGTGGCC
ATCCCGAAGG GCCGTTCCGA GCTGGACCGT GTGGTTGATA TCGACGGCGG CTTGTTGCTG
TCTGGTGGTA CCCTGTACGT CAGCACCTAC CAGGGCCGTG TAGCGGGCCT GGACCTGGAA
AGCGGCCGCG AGCTGTGGCA GCGCGATGCT TCCAGCTATG TGGGTGTCGC CCAGGGCTTC
GGTAACGTCT ACGTCAGCGA AGCCTCGGGT ACCGTGGAAA GTGTGGATGA GCGCTCTTCC
AGTGCCCTGT GGAGCAACGA CAGCATGGCT CGCCGCCAGT TGACCGCCCC TGAAGTGTTC
AGCAGCTACG TGGCTGTGGG TGACTTTGAA GGTTACCTGC ACCTGCTGAG CCAGGTGGAT
GGCCGCTTCG TAGGCCGTGA GCGTATCGAC AGCGATGGCC TGCGCGCCCG CCCACTTGTG
GTCGGCGACA CCATCTATGT CTTCGGCAAC AGCGGCAAGC TCGAGGCACT GACCATCCGC
TGA
 
Protein sequence
MIGWKHAAVL TLAVLAAGCS SNSKKELPPA ELTKFTEEVV LKKQWSRSIG DGQGETYNTL 
VPAIENDRIY ASDVNGEVFA LDRITGDVVW KKDLELQVSG AVGVGYGLVM LGTLKGEVIA
LDSSTGEERW RSRVTSEVLA PPANNGDVVV VQTQDDRLIG LDAATGDRRW IYENSPAVLT
LRGTGAPIAT NRLAVAGLST GKVVAVDINN GVPVWESRVA IPKGRSELDR VVDIDGGLLL
SGGTLYVSTY QGRVAGLDLE SGRELWQRDA SSYVGVAQGF GNVYVSEASG TVESVDERSS
SALWSNDSMA RRQLTAPEVF SSYVAVGDFE GYLHLLSQVD GRFVGRERID SDGLRARPLV
VGDTIYVFGN SGKLEALTIR