Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0856 |
Symbol | |
ID | 1044724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 990118 |
End bp | 991260 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637144251 |
Product | hypothetical protein |
Protein accession | NP_743017 |
Protein GI | 26987592 |
COG category | [S] Function unknown |
COG ID | [COG1520] FOG: WD40-like repeat |
TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGGTT GGAAACATGC AGCAGTGCTG ACCCTGGCCG TACTGGCCGC AGGTTGCAGC AGCAACAGCA AGAAGGAACT GCCCCCGGCC GAGCTGACCA AGTTCACCGA GGAAGTGGTG CTGAAGAAGC AGTGGAGCCG TTCGATCGGT GACGGCCAGG GTGAAACCTA CAACACCTTG GTACCGGCCA TCGAGAACGA CCGTATCTAC GCTTCCGACG TCAACGGCGA AGTCTTCGCC CTCGACCGCA TCACCGGTGA CGTGGTGTGG AAGAAGGACC TGGAGCTGCA GGTTTCCGGT GCAGTTGGCG TAGGCTATGG CCTGGTCATG CTCGGTACCC TCAAGGGTGA AGTCATTGCC CTGGACTCCA GCACCGGTGA GGAGCGTTGG CGCTCGCGCG TGACCAGCGA AGTGCTGGCC CCACCTGCCA ACAACGGTGA CGTGGTGGTG GTGCAGACCC AGGACGATCG CCTGATCGGC CTGGATGCCG CCACTGGCGA CCGCCGTTGG ATCTACGAAA ACTCGCCGGC CGTGCTGACG CTGCGTGGCA CCGGTGCGCC GATCGCCACC AACCGCCTGG CGGTTGCCGG CCTGTCTACC GGCAAGGTAG TGGCGGTGGA CATCAACAAC GGTGTGCCGG TGTGGGAGAG CCGCGTGGCC ATCCCGAAGG GCCGTTCCGA GCTGGACCGT GTGGTTGATA TCGACGGCGG CTTGTTGCTG TCTGGTGGTA CCCTGTACGT CAGCACCTAC CAGGGCCGTG TAGCGGGCCT GGACCTGGAA AGCGGCCGCG AGCTGTGGCA GCGCGATGCT TCCAGCTATG TGGGTGTCGC CCAGGGCTTC GGTAACGTCT ACGTCAGCGA AGCCTCGGGT ACCGTGGAAA GTGTGGATGA GCGCTCTTCC AGTGCCCTGT GGAGCAACGA CAGCATGGCT CGCCGCCAGT TGACCGCCCC TGAAGTGTTC AGCAGCTACG TGGCTGTGGG TGACTTTGAA GGTTACCTGC ACCTGCTGAG CCAGGTGGAT GGCCGCTTCG TAGGCCGTGA GCGTATCGAC AGCGATGGCC TGCGCGCCCG CCCACTTGTG GTCGGCGACA CCATCTATGT CTTCGGCAAC AGCGGCAAGC TCGAGGCACT GACCATCCGC TGA
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Protein sequence | MIGWKHAAVL TLAVLAAGCS SNSKKELPPA ELTKFTEEVV LKKQWSRSIG DGQGETYNTL VPAIENDRIY ASDVNGEVFA LDRITGDVVW KKDLELQVSG AVGVGYGLVM LGTLKGEVIA LDSSTGEERW RSRVTSEVLA PPANNGDVVV VQTQDDRLIG LDAATGDRRW IYENSPAVLT LRGTGAPIAT NRLAVAGLST GKVVAVDINN GVPVWESRVA IPKGRSELDR VVDIDGGLLL SGGTLYVSTY QGRVAGLDLE SGRELWQRDA SSYVGVAQGF GNVYVSEASG TVESVDERSS SALWSNDSMA RRQLTAPEVF SSYVAVGDFE GYLHLLSQVD GRFVGRERID SDGLRARPLV VGDTIYVFGN SGKLEALTIR
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