| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0854 |
|---|
| Symbol | hisS |
|---|
| ID | 1044721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 988147 |
|---|
| End bp | 989436 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637144249 |
|---|
| Product | histidyl-tRNA synthetase |
|---|
| Protein accession | NP_743015 |
|---|
| Protein GI | 26987590 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAAAT CGCTGCAAGC CATCCGTGGC ATGAACGACA TCCTGCCAGA ACAGTCGCCG
CTGTGGCGCT ACTTCGAAGG CACAGTGGCC GGGCTGCTGG ACACCTATGG GTACAGCCAG
ATCCGCACGC CGATCGTCGA GTTCACCGAG CTGTTCAAAC GCTCGATCGG TGAAGTGACC
GACATCGTCG AAAAAGAGAT GTACACCTTC GAGGACCGCA ACGGCGATTC GCTGACCCTG
CGCCCTGAAG GCACTGCGGC TTGCGTGCGA GCGGTGCTTG AGCACGGCAT CACCGGCAAC
GGTCAGGTGC AGAAGCTGTG GTACATCGGC CAGATGTTCC GCCACGAGCG TCCACAGAAG
GGCCGCTACC GCCAGTTCCA CCAGATTGGC GTGGAAGTGT TCAACCTGGA CGGCCCGGAC
ATCGATGCCG AGCTGATCAT GCTGACCTGG CGCCTGTGGG GCCTGCTGGG CATCCAGGAC
GCGGTCAAGC TGGAGCTCAA CAGCCTGGGC ACCAGTGAAG CCCGCGCACG CTACCGTGAC
GCGCTGGTCG AGTTCCTCTC GGCGCGCCTG GAGCAACTGG ACGAAGACAG CCAGCGCCGC
CTGAAGAGCA ACCCGCTGCG CATCCTCGAC AGCAAGGACC AGAACACCCA GGCGGTGCTG
GTCGGAGCGC CGAAGCTGGA AGACTACCTG GACGAAGAAT CGCGCGTGCA CTTCGAGGGC
CTCAAGGCCC GCCTGGACGC TGCCGGTATT CCGTTCGTGA TCAACACCAA GCTGGTACGC
GGCCTGGACT ACTACAGCAA GACCGTGTTC GAGTGGGTAA CCGACAAGCT CGGTGCCCAG
GGCACGGTGT GCGCGGGTGG CCGTTACGAC GGCCTGGTCG AACAGATGGG TGGCAAGCCG
ACCACTGGCG TTGGTTTCGC CATGGGCATC GAGCGCCTGA TCCTGCTGTT GGAAACCCTG
GGCAAGGTGC CGGAGTCCAT CAGCCGCCAG ATCGACGTTT ACCTGTGCGC CTTTGGCGAA
CAGGCGGAGC TGGCCGGCCT GCGCCTGTCC GAAGGCTTGC GCGACCGCTT GCCGGGCCTG
CGCCTGGCAG TCAACGCCGG TGGTGGCAGC TTCAAGAGCC AGTTCAAGAA AGCCGACAAG
AGCGGTGCAC TGTTCGCCCT GATCCTCGGC GACGACGAGC TGGCCAAGCA AGAAATCGGC
TTGAAGCCCC TGCGTGGCCA GGGTGAACAA CAGAACATTG CCTGGGATGC TCTTGCAGAG
CACCTGGAAA CCGCGATCGC GCAAGCGTAA
|
|---|
| Protein sequence | MSKSLQAIRG MNDILPEQSP LWRYFEGTVA GLLDTYGYSQ IRTPIVEFTE LFKRSIGEVT
DIVEKEMYTF EDRNGDSLTL RPEGTAACVR AVLEHGITGN GQVQKLWYIG QMFRHERPQK
GRYRQFHQIG VEVFNLDGPD IDAELIMLTW RLWGLLGIQD AVKLELNSLG TSEARARYRD
ALVEFLSARL EQLDEDSQRR LKSNPLRILD SKDQNTQAVL VGAPKLEDYL DEESRVHFEG
LKARLDAAGI PFVINTKLVR GLDYYSKTVF EWVTDKLGAQ GTVCAGGRYD GLVEQMGGKP
TTGVGFAMGI ERLILLLETL GKVPESISRQ IDVYLCAFGE QAELAGLRLS EGLRDRLPGL
RLAVNAGGGS FKSQFKKADK SGALFALILG DDELAKQEIG LKPLRGQGEQ QNIAWDALAE
HLETAIAQA
|
|---|
| |