Gene PP_0834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0834 
SymbolyajC 
ID1044692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp971308 
End bp971643 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content58% 
IMG OID637144229 
Productpreprotein translocase subunit YajC 
Protein accessionNP_742995 
Protein GI26987570 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.550481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.385632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCT TCATCCCCGC CGCATACGCG GACGCTGCAG CACCTGCCGC TGGCCCAGCC 
GGTACCGGCT TCGAGTGGAT TTTCCTGGTC GGTTTCCTGG TCATCTTCTA CCTGATGATC
TGGCGCCCGC AGGCCAAGCG CGCGAAAGAG CAGAAGAACC TGCTGAGCAA CTTGCAGAAA
GGTGACGAAG TTGTCACCAA CGGCGGCATC GCCGGCAAGA TCGTCAAGGT TTCCGATGAC
TTCGTGGTGC TGGAAGTGTC CGACACTGTC GAGCTGAAGT TCCAGAAGGG TGCCATTGCT
GCGACCCTGC CAAAAGGTAC GCTCAAGGCT ATCTGA
 
Protein sequence
MSFFIPAAYA DAAAPAAGPA GTGFEWIFLV GFLVIFYLMI WRPQAKRAKE QKNLLSNLQK 
GDEVVTNGGI AGKIVKVSDD FVVLEVSDTV ELKFQKGAIA ATLPKGTLKA I