| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0827 |
|---|
| Symbol | |
|---|
| ID | 1044683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 965017 |
|---|
| End bp | 965784 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637144221 |
|---|
| Product | phosphonate ABC transporter inner membrane protein |
|---|
| Protein accession | NP_742988 |
|---|
| Protein GI | 26987563 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0220667 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGGG TGATCAACTG GGTGTTGCTG GGCGCCATCG TGGCAGCGGC GGTGGCCTCG
TTCGCGTATC TGCAGCTGGA CCTGCACGCA CTGGTCGGCA ATGGCGGGCT GGGGCAGATG
GGCGAGTACG CCGGGCGCTT CCTGCAGCCG GATCTGTCTG CGGGGCACCT CAAGGCGGTG
TGGCGCGGGG CGCTGGAAAC CCTGGCCATG TCTGGCATGG GCACCTTGTT GGCAATGGTA
TTGGGGATGT TGCTGGCACT GCCGGCGGCG GGGCGCTTCG GTTGGCCGTT GCAAGGGGCC
GCGCGTTTGC TGCTCAATGC CTTGCGTGCC ATTCCTGAAC TGGTGTGGGC AGCGCTGACT
GTGCTGGCGG CTGGGCTGGG GCCGAATGCC GGTACCCTGG CTTTGGCGTT GCACACCGCT
GGCGTGCTGG GGCGTTTGTT TGCCGAGGCG CTTGAGAACG CCCCGCCCGA GCCGGCGGCG
GCGATCCGTT TGCAGGGGGG CAGCCAGGTG GCGGCGTTCT GCTTTGGTAC CCTGCCCAAC
CTGTGGCCGC AGTTGCTGGC CTACAGCTTG TACCGCTGGG AGAACAACAT CCGCATGGCC
AGCGTGCTCG GCTTCGTCGG GGCGGGCGGG TTGGGGCAGA TGCTGTACAC CACCTTGAGC
CTGTTCCAGG AGGCCCAGGC CAGCACGGTG ATCATCGGTA TGCTGGTGTT GGTGTTGCTG
GTGGATGTGT CGAGTGATGT GTTGCGTCAG CGCTACGTGC GGGCCTGA
|
|---|
| Protein sequence | MNRVINWVLL GAIVAAAVAS FAYLQLDLHA LVGNGGLGQM GEYAGRFLQP DLSAGHLKAV
WRGALETLAM SGMGTLLAMV LGMLLALPAA GRFGWPLQGA ARLLLNALRA IPELVWAALT
VLAAGLGPNA GTLALALHTA GVLGRLFAEA LENAPPEPAA AIRLQGGSQV AAFCFGTLPN
LWPQLLAYSL YRWENNIRMA SVLGFVGAGG LGQMLYTTLS LFQEAQASTV IIGMLVLVLL
VDVSSDVLRQ RYVRA
|
|---|
| |