Gene PP_0814 details

Gene Information

• Locus tag: PP_0814
• Symbol: cyoC
• ID: 1044663
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida KT2440
• Kingdom: Bacteria
• Replicon accession: NC_002947
• Strand: +
• Start bp: 953190
• End bp: 953813
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637144208
• Product: cytochrome o ubiquinol oxidase, subunit III
• Protein accession: NP_742975
• Protein GI: 26987550
• COG category: [C] Energy production and conversion
• COG ID: [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3
• TIGRFAM ID: [TIGR02842] cytochrome o ubiquinol oxidase, subunit III

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.692296
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 0.295245
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCCAGTC AAGTAATGCA CGGCGCTGCT CATGGTCACG ACCATGGGCA TGACGACCAC 
CACCACGACT CGGGCCAGAT GACCGTACTG GGCTTCTGGC TGTACCTGAT GACCGACTGC 
ATCCTGTTTG CGTCGCTCTT CGCCACCTAC GCGGTGCTGT CCGGCAGTTT TGCCGGCGGC 
CCGTCGGGTC ATGACATCTT CCAGCTTGAT TTCGTAGCTG TTGAAACGCT GTTCCTGCTG 
CTGTCCTCGA TCACCTTCGG CTTCGCCATG CTGAAGATGT TCGATGGCAA GAAAGCAGGT 
GTACTGGGCT GGTTGGCTGT GACCTTCCTG TTCGGTGCAG GCTTCATCGC GATGGAAATC 
TATGAGTTCC ATCACCTGAT CAGCGAGGGC TTCGGCCCGC AGCGCAGTGG CTTCCTGTCG 
GGCTTCTTCG CCCTGGTAGG TACCCACGGT CTGCACGTGA CTGCTGGTCT GATCTGGATG 
GCAATCATGA TGTACCAGAT CAACAAGCAC GGCATCACGC CGACCGCCAA GACCCGCATG 
AGCTGCCTGA GCCTGTTCTG GCACTTCCTG GACGTGGTCT GGATCTGCGT ATTCACCGTC 
GTTTACCTGC TGGGGGTTCT GTAA 

 

Protein sequence

MSSQVMHGAA HGHDHGHDDH HHDSGQMTVL GFWLYLMTDC ILFASLFATY AVLSGSFAGG 
PSGHDIFQLD FVAVETLFLL LSSITFGFAM LKMFDGKKAG VLGWLAVTFL FGAGFIAMEI 
YEFHHLISEG FGPQRSGFLS GFFALVGTHG LHVTAGLIWM AIMMYQINKH GITPTAKTRM 
SCLSLFWHFL DVVWICVFTV VYLLGVL