| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0805 |
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| Symbol | |
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| ID | 1044650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 925187 |
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| End bp | 926623 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637144199 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | NP_742966 |
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| Protein GI | 26987541 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCGAA GCAGTCCGCT GTCACCGCTG TTGCTGGGAG CCTTCGGGCT CCTGGCCCTG
AACTTCCACC CGGTTGCCCA GGCAGCCGAT GATATAGACC CCCACCTGCG CCAGATCGGG
CCGTCGCTGC TACGCGATGC GCCCGAAGCG GTGCCCGCCC GCCCCCCCAT CGGCATGGCC
CCGGTCGCCA GTGGCGAACG GCTGAGCCTT ACCGACGCGG TGCTGCAGGC AGCGCAATGG
CACCCGAGCA TCGCTGAGGC CATCGGCAAC CTTTACAAGC AGGGCGAAGG CATCAACGTC
GCCCGTGCGG GGTATTACCC ACAGATTTCC GGCGGTATCC GCACCGGTTA TGACACCGGC
TATGGCGGCG ACCGCAATAG CCAGGCCCTG AACCTGTCGC TCAAGCAAAT GCTCTATGAC
TTCGGCAAGG TCGACAGCGC CGTCAACGCG GCCCAGGCTG CCGCCGCCCG GGCCCAGGCC
AATATCCTGC TGGTGGTCGA CGACCTGGCC CGCGACACAG CCTATGCCTG GATCGAGACC
CGCCGCTACG AGCAACTGAT GACGATTGCC CGCGACCAGA TTCGCGGCGT GGGCGACATT
GCCGGCATGG CCCGCCAGCG CAGCGACATG GGCGCCAGCA CCCGTTCCGA CGTGGTACAG
GCCGAGTCCC GCGTGGAAAG CGCCCGTGCC ACCCTGGAGG AGTACCAGTC GCAGTACGAG
CGCTGGCGCT CGACCCTGGC GGCGCTGATG GGTCGCGTTA CCCCTCCGGC ACTGGCCGAG
GGCTCACCCG CCGAGCTGGA CCAGGCCTGC AAGCGCCCTG CACAGGGTGA TGATCGCCTG
CCCGCCGTGC TGATGGCCCT GGCCCAGCGC GCACAGGGCC AGGCCGAGCT GGCCCAGGCC
AAGGCGGAGG CCTACCCTAC CCTGTCGTTG CAACCGCAGG TCAATCATTA CCTGGACGAC
GACTACAACC GCGATAACGC ACGGCTGGAC CGCACCCAGG CGGGCATCTA CCTGAACGTC
GAAGTTCCCA TCTACCAAGG GGGCTCCATC AGCGCCCGCA CCCGCGCTGC CGGCCACGCG
CTGACCGCCG CCGACTCCGC CGAAGACGCC GCACGGCTGC AGGCGCGTCG GGGCCTGGCG
GAGGCCAAGG CGCAAACCTC CGGGCTGGGC CGCCGGCTGA CTTCGCTGGA AGCCCGCCAG
GTCAGCATCC AGGAGGCACG CATGCTCTAC GGGCGTCAGT ACCTGGACCT AGGGACACGG
CCACTGCTCG ACCTGCTCAA CGCCGAGCAG GAGATCTACC AGTCACGCTT CGAACTTGCC
GGCACCCGCT CCGATCTGCT GCGCCTGGAT GTCGACTGCC TGTACAACAC CGGCGCCCTG
CGCACGGCCT TTGGCCTTGA GGGGCGCAAC CTGCAAGGTG TGGAGATCCA GCCATGA
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| Protein sequence | MKRSSPLSPL LLGAFGLLAL NFHPVAQAAD DIDPHLRQIG PSLLRDAPEA VPARPPIGMA
PVASGERLSL TDAVLQAAQW HPSIAEAIGN LYKQGEGINV ARAGYYPQIS GGIRTGYDTG
YGGDRNSQAL NLSLKQMLYD FGKVDSAVNA AQAAAARAQA NILLVVDDLA RDTAYAWIET
RRYEQLMTIA RDQIRGVGDI AGMARQRSDM GASTRSDVVQ AESRVESARA TLEEYQSQYE
RWRSTLAALM GRVTPPALAE GSPAELDQAC KRPAQGDDRL PAVLMALAQR AQGQAELAQA
KAEAYPTLSL QPQVNHYLDD DYNRDNARLD RTQAGIYLNV EVPIYQGGSI SARTRAAGHA
LTAADSAEDA ARLQARRGLA EAKAQTSGLG RRLTSLEARQ VSIQEARMLY GRQYLDLGTR
PLLDLLNAEQ EIYQSRFELA GTRSDLLRLD VDCLYNTGAL RTAFGLEGRN LQGVEIQP
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