| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0804 |
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| Symbol | |
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| ID | 1044647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 923022 |
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| End bp | 925190 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637144198 |
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| Product | protein secretion ABC efflux system, permease and ATP-binding protein |
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| Protein accession | NP_742965 |
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| Protein GI | 26987540 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0384616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATT CGATCGATGT GACCCTGCCC AACCAGGCGC CCGCGCCGGA GCAGGCCGCC
GCCCACCGGC CAGACCTTGG CCCCTGGCTT GAGGTGATGT TGCAGGTGGC ACACCACTAC
CGCCTGGACG TATCACCCCA GCGTATTCGC CTGGCCGCTG CGGAGGATGC CCGCCCGTTG
AATGAAATCC TCCGCCACAT GGCACGTCAG GCGGGGCTGG CATTGCGCTT CGTGCACTTC
GATGCCAAGG GCCTGCGGCA ATGGCGCACG CCGCTGGTGC TGGAGCTGGA CGATGGGCAG
CTGGCGGTGG TCGAGTCGGT GACCGAAGAG GACGACCTGG CAGTGGTGTT CGCCGGTGAC
CAGGGCCTGA CTTCGCGCCT GCCCCGCGAC ACCCTCAAAG GCCGTATCAG CCGCGTGGCC
CTGCTGCGCC CGGCCCGGCC ACTGCGCGAT GTGCGCACCG ACGACTACAC CGCGCCTTAC
GACCGCCACT GGTTCGCCCG CATCGTACTG CGTGACTTGC GCCCTTATGG GCAGGTGATG
ATCGCTTCAC TGGTGGCCAA CGTGCTGGCG CTGGCCGGCG TGCTGTTCTC GATGCAGGTG
TACGACCGAG TGATACCGGC CGAATCCCTA CCCACTCTCT ACGTCCTGTT TGGCGGTGTG
GTGTTGGCAC TGGTGTTCGA CTTCAGCATG CGCCTGCTGC GGCTAAAGGT GACCGACCTG
CTCGGCAAGC GCGCCGACCT GCGGGTGAGC GACCTGGTCT ACGGCCATGC CCTGCGCCTG
CGCAACTCGG TGCGGCCCAA GTCCACCGGC TCGTTCATCT CGCAGTTGCG CGAGCTGGAG
TCGATCCGCG ACCTGATCAC GTCCAGCACC GCGACGGTGC TGGCCGACCT GCCGTTCTTC
CTGCTGTTCC TGTTCGTGTT CTGGCTGATC GGCGGCGTAC TGGTGTTCAT CCCGCTGGTC
GCGCTGCTGG CCATGGTGCT GCCCGGGTTG CTTGCACAAA GGCGCCTGGC ACGGTTGGCC
AATGCCTCGA TGCGTGAGTC GGCGCTGCGC AACGCCATGC TGGTGGAAAG TATCCAGGGC
CTGGACGAGA TCAAGGCACT GCAGGCAGAG GCACGCTTCG AACGGCAGTG GAACCAGTAC
AACGCGGCCT GCGCGCACAC CAACCTGCGC CTGCGCACCC TCACCAACGG CCTGGTGACC
TGGACGCAGA ACGTGCAGGG TGCCGTGTTT GCCGTGGTCA TCGTGATCGG CGCTCCCATG
GTCATCGCCG GCGACCTCAC CACGGGTAGC CTGGTGGCGG CATCCATGCT TTCATCGCGA
ATGATGGCGC CGTTGGCCCA ACTGACCCAT GTGCTGACCC GCTGGCAGCA GGCCAAGGTC
GCGCTGCAAG GCCTGGACAA GCTGATGCAG TCGCCGGTCG ATCACCCCGA AGGCGAAGCC
CGCGTGCACC TGCCGGCCAT TCACGGCGAG TACCGCCTGC GCCAGGCCAA CTTCCGCTAC
AGCGAAGACT ACCCGCCAGT GCTGAACATT GGCCGGCTGG ATATCCAGCC GGGCGAGCGC
ATTGCCGTGC TGGGCCGCAA CGGCGCCGGC AAATCAACCT TGCTGCAGGC GCTGGGTGGG
GCCATGGATC TGGTGCAGGG CGAGATCAGC CTGGACGGCA TCGCCATGGC CCACCTCGAC
CCTGCTGACC TGCGCCGTGA CGTCGGCCTG CTGCCGCAGT ACGCGAGGCT GTTCCACGGC
ACCCTGCGGG AAAACCTCAC CCTCGGTGCC GGCCAGGCCA GCGACCAGGA ACTGGTGGCC
GCGCTGGCCG CCACTGGCGC ACTGGACTTC GTCCGCCGCC TGCCCAAGGG CATGGACCAC
TTGATCCTCG AAGGAGGCCT GGGCTTGTCT GGCGGCCAGC GCCAAGCCCT GGTGCTGTCG
CGCCTGCTGG TACGCCAGCC GCAGGTGCTG TTGCTGGACG AGCCGACCGC GTCGCTGGAC
GACATGACCG AGCGCAAGCT GCTGGATAAC CTGGAGCGCT TCTGTCAGGG CCGTACACTG
GTGATCGCAA CCCATCGCCT GAGTGTTCTG CAGCGGGTCG ACCGCATCCT GGTGCTGGAC
GCCGGGCGCA TCGTCATCGA TGACGCGCGC GATGCCGCGC TGGCCAAACT GCAGGGAGCC
CAGGCATGA
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| Protein sequence | MSDSIDVTLP NQAPAPEQAA AHRPDLGPWL EVMLQVAHHY RLDVSPQRIR LAAAEDARPL
NEILRHMARQ AGLALRFVHF DAKGLRQWRT PLVLELDDGQ LAVVESVTEE DDLAVVFAGD
QGLTSRLPRD TLKGRISRVA LLRPARPLRD VRTDDYTAPY DRHWFARIVL RDLRPYGQVM
IASLVANVLA LAGVLFSMQV YDRVIPAESL PTLYVLFGGV VLALVFDFSM RLLRLKVTDL
LGKRADLRVS DLVYGHALRL RNSVRPKSTG SFISQLRELE SIRDLITSST ATVLADLPFF
LLFLFVFWLI GGVLVFIPLV ALLAMVLPGL LAQRRLARLA NASMRESALR NAMLVESIQG
LDEIKALQAE ARFERQWNQY NAACAHTNLR LRTLTNGLVT WTQNVQGAVF AVVIVIGAPM
VIAGDLTTGS LVAASMLSSR MMAPLAQLTH VLTRWQQAKV ALQGLDKLMQ SPVDHPEGEA
RVHLPAIHGE YRLRQANFRY SEDYPPVLNI GRLDIQPGER IAVLGRNGAG KSTLLQALGG
AMDLVQGEIS LDGIAMAHLD PADLRRDVGL LPQYARLFHG TLRENLTLGA GQASDQELVA
ALAATGALDF VRRLPKGMDH LILEGGLGLS GGQRQALVLS RLLVRQPQVL LLDEPTASLD
DMTERKLLDN LERFCQGRTL VIATHRLSVL QRVDRILVLD AGRIVIDDAR DAALAKLQGA
QA
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