| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0798 |
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| Symbol | |
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| ID | 1044640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 916074 |
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| End bp | 917564 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637144192 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | NP_742959 |
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| Protein GI | 26987534 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.412232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCC AATCCCCGCG TTTCGCAGTC TACAGGTCGC ACCCCGAGCT GATCCTCAAC
CTGGGCAGTT GCCTTGCCGT GCTCGCCATC GTGGCCATCG TCAGCTATCT GCTTGCCCGC
GAGCGCGATA GTGTCGAGCA GTCGGCGGTG CGCTCGTCGA ACAACATCGT GCAGCTGATC
GAAAGCGACA TTCTGCGCAA CGTCGAACTC TACGACCAAT CCCTGCAAGG CTTGATCTGG
GCGGTTGGCC GCAAGGAACT GCCGGAAGTC CCCGGCCCGA TACGCCAGCG CCTGCTTTTC
AATGAAGCCT TCGTCGACCG CAAGCGCGGT GACGTGCTGT GGCTGGACAA GCAAGGCAAT
ATCGTTGGCG ACTCCACCAG TAGCGTGCCG CGCAAGGCCA ACTTCGGCGA AACCGGGGTG
TTCAAGGCCC ACCAGCACAA TGCCAACCTC GGCTTGCTGG TGGGCCCCCC TTTCAAGGCC
AAGCTTGGCG ACCTGGACTG GTGTATCAGT TTCAGCCGAC GTATCTCCGG CCCCAATGGC
GAGTTCGCCG GGTTGGCAGC GGGTGCGCTG CGCCTGTCGT ACTTCAATGA GTTGTTCCAG
CGCCTGGACA TTGGCCACGA CAGCAGCATC AACCTGTTCA ATACCGATGG GCAGCTGCTC
GTCCGCCAGC CCTACCGCGG GCAGGACCCG CTGATTGGCA CCTACTACAC CGAACGGCCC
AATTTCAAAC GCATCCTCAG TGAACAGAGC GGTAGCTTCA CCGCCCGCTC CCACAGCAGC
GGCAAGCTGC GCATGTTCAC CTTCGCCCGG GTCGCGCAGT TGCCACTGAT CGTGCTAGTG
GCGCACTCGG CCGACGAGGT GTTCGAGTCC TGGCGCCGCA CCGCCATTCT GGTCAGCGTC
GCCACCGGCG GTCTGTGCGT GGGCATTCTC TGGCTGACAT TGCTGCTGGG CCGCGAACTG
CGCCGCCGCC ACGAAGCCGA AGAAGACCTG GCCATGCTCG CTTCCACCGA TAGCCTGACT
GGCCTGGCCA ACCGCCGCAG GCTGGACCAT GTGCTGCGCC AGGAATGGGC CCGCGCCCAA
CGTAGCCGTA AGCCGCTGGC GATACTGATG GTGGACGTGG ACCACTTCAA GGCATTCAAC
CAGCGCCATG GCCATGCCGG CGGCGACCAT GCCTTGCGCG AGGTGGCCAA GGCCATCGAG
GCATGCATTC GTCGCCCTGC GGACCTGGCT GCGCGCTATG GTGGGGAGGA GTTTCAGGTA
GTGTTGCCAG AAACCGATCT GGCCGGGGCC CAGCTACTGG CTGAACGCAT CCGAGCCAAC
GTCGAGGCGC TGGCGCCGTT TGCGGATGAT GCCCACGCCG TGACCGTGAG CATCGGTATC
GGTCTGTCCG GCACCCAGCA GGACCTTGGC AGGCTGCTGG GTGCTGCGGA CGAAGCGCTC
TACCGGGCCA AGGCCAATGG CCGCAATCGG GTAGAGGGCC CGCTTGATTA G
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| Protein sequence | MPTQSPRFAV YRSHPELILN LGSCLAVLAI VAIVSYLLAR ERDSVEQSAV RSSNNIVQLI
ESDILRNVEL YDQSLQGLIW AVGRKELPEV PGPIRQRLLF NEAFVDRKRG DVLWLDKQGN
IVGDSTSSVP RKANFGETGV FKAHQHNANL GLLVGPPFKA KLGDLDWCIS FSRRISGPNG
EFAGLAAGAL RLSYFNELFQ RLDIGHDSSI NLFNTDGQLL VRQPYRGQDP LIGTYYTERP
NFKRILSEQS GSFTARSHSS GKLRMFTFAR VAQLPLIVLV AHSADEVFES WRRTAILVSV
ATGGLCVGIL WLTLLLGREL RRRHEAEEDL AMLASTDSLT GLANRRRLDH VLRQEWARAQ
RSRKPLAILM VDVDHFKAFN QRHGHAGGDH ALREVAKAIE ACIRRPADLA ARYGGEEFQV
VLPETDLAGA QLLAERIRAN VEALAPFADD AHAVTVSIGI GLSGTQQDLG RLLGAADEAL
YRAKANGRNR VEGPLD
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