Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0791 |
Symbol | |
ID | 1044632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 907432 |
End bp | 908208 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637144185 |
Product | TatD family deoxyribonuclease |
Protein accession | NP_742952 |
Protein GI | 26987527 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCTGA TCGACACCCA CACCCACCTG GACTTCCCCG ACTTCGACGC CGACCGCCCG CGCCTGCTGG CCAACGCGGC GGCGCGTGGG CTGGAGCGAA TGGTGGTGCT GGGGGTGTAC CAGGCGAATT TCCAGCGGGT GTGGGAACTG GCCTGCGCCG AGCCGCGCCT GTTCGCCGCG CTTGGCCTGC ACCCGGTCTA CCTCGACCAG CATCGCCCTG AGCACCTGGT GCAACTGCGC GAGTGGCTGG AGCGCCTGCG CGACAACCCG CGGCTATGTG CCGTAGGTGA GTTCGGCCTG GACTATTACC TCGCAGACCT TGACAAGACC CGCCAGCAGG CGCTGTTCGA AGCGCAACTG CAGATGGCTT GCGACTTCGA ACTACCGGCC CTGCTGCACG TGCGCCGCAG CCATGCCCAG GTGATTGCCA CACTCAAGCG CTACAAGCCA GCACGGGCGG GGGTGATTCA TGCGTTTGCC GGCAGCTACG AAGAGGCCCG CGAGTACATC AAGCTGGGCT TCCTGCTGGG GTTGGGCGGT GCGGGTACCT GGCCGCAGGC GCTGCGGCTG CGCAAGACCT TGGCGCGGCT GCCACTGGAA AGTGTGGTGC TGGAGACTGA CTCACCGGAC ATGGCACCGG CGATGTACCC GGGGGTACGC AACAGCCCGG AGCATCTGCC GGAAATTGCC ACGGCGCTTG CGCACGTGAT GGGGCTGGAT GTCGAGGTGC TGGCACAGGC CAGCACCCGC AATGCTTGCA CGTTGTTCGG CTGGTGA
|
Protein sequence | MRLIDTHTHL DFPDFDADRP RLLANAAARG LERMVVLGVY QANFQRVWEL ACAEPRLFAA LGLHPVYLDQ HRPEHLVQLR EWLERLRDNP RLCAVGEFGL DYYLADLDKT RQQALFEAQL QMACDFELPA LLHVRRSHAQ VIATLKRYKP ARAGVIHAFA GSYEEAREYI KLGFLLGLGG AGTWPQALRL RKTLARLPLE SVVLETDSPD MAPAMYPGVR NSPEHLPEIA TALAHVMGLD VEVLAQASTR NACTLFGW
|
| |