Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0746 |
Symbol | upp |
ID | 1044582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 865185 |
End bp | 865823 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637144140 |
Product | uracil phosphoribosyltransferase |
Protein accession | NP_742907 |
Protein GI | 26987482 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0035] Uracil phosphoribosyltransferase |
TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.559467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACTC GTGAGATCCG CCATCCGCTG ATCCGCCACA AGCTTGGCCT GATGCGCCGT GCCGATATCA GCACCAAGAA TTTTCGCGAA CTCGCCCAGG AAGTCGGCGC GCTCCTGACG TATGAAGCCA CCCAGGACCT GCCCCTCGAA ACCTACGAGA TCGACGGCTG GTGTGGCAAG GTCTCGGTTG AAAAAATCGC CGGCAAGAAG ATCACCGTAG TACCGATCCT GCGCGCCGGC ATCGGCATGC TCGACGGCGT GCTCAGCCTG ATCCCGGGGG CCAAGGTCAG CGCCGTCGGC GTTGCCCGAA ACGAAGAAAC CCTCGAAGCC CACACCTATC TGGAAAAGCT CGCGCCGGAC ATCAACCAGC GCCTGGCCCT GATCATCGAC CCGATGCTGG CCACCGGCGG CTCGATGGTT GCCACCATCG ACCTGCTGAA AAAGGCCGGC TGCAAAGAGA TTCGCGCCAT GGTGCTGGTC GCCGCACCAG AAGGCATCGA GGTGGTGGAA AAAGCCCACC CGGACGTGAA GATCTACACC GCCTCGATCG ACCAGCGCCT GAACGAGCAC GGCTACATCG TGCCAGGCCT GGGTGATGCC GGTGACAAGA TCTTCGGCAC CAAGCAAAAG GACGCCTGA
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Protein sequence | MPTREIRHPL IRHKLGLMRR ADISTKNFRE LAQEVGALLT YEATQDLPLE TYEIDGWCGK VSVEKIAGKK ITVVPILRAG IGMLDGVLSL IPGAKVSAVG VARNEETLEA HTYLEKLAPD INQRLALIID PMLATGGSMV ATIDLLKKAG CKEIRAMVLV AAPEGIEVVE KAHPDVKIYT ASIDQRLNEH GYIVPGLGDA GDKIFGTKQK DA
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