Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0730 |
Symbol | |
ID | 1044563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 847257 |
End bp | 848567 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637144124 |
Product | hypothetical protein |
Protein accession | NP_742891 |
Protein GI | 26987466 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0439] Biotin carboxylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACACG TGGTTTTCGT CGACAGCACC GTAAGCGGCC TGCTGGCTTT TGAGGCAGCC AAACGGCTTG GCTGCCACGT CACCTTCATT CATCAGCGCG ACGCCTCGTT CCTGACGATC TCGATCAAGG ACGACACCTC CCGTCTCGAG CCTTACCTGC GATATGTGGA TGCTTATTTG CGTATCGATA ATCTGGAAGG CGGCGAATTC AGCCGGTTGT TGGCCAACCT GCACGCAGAG CGCCCTATTG ACGCCCTGAT CTCTACCTCT GAAGCAGCCA TAGTACCGGT GGCGCGGGAG GCCCAGCGCA TCGGCACCCT CTACCCGAGG TACGAAGCTC TGTGCGGGGC GGTATACAAG AGTCGACTGC GCGAAACGCT GCGGGCACAC GGACTACGCT CTCCTGATTT TGAAGTACTA AGCGAGGAGC AACTGATCAA TGGGGTCGTT CCGAGTTTGT CGCTGCCATT CGTTGTCAAG CCGACCCGAG GGTTCGCCAA GCAGTTTTCC GCCATATGCC ATAGCCAGAC CGACTTTGAC GCCTTTCTCG CCGAGCTGCG CCAGAGTCGC AAGGGTGCTG ATCCTATGAT CGACCACTTG GTAAGCCGCG ACTATCTGGT CGAGCAATAC ATCGACGGTA CATTGCATTC AGCGGAAGTC ATCGTCCAGG ACACCAAGGT CTCCTGCTTT GCGACCACCA TCCGTTTCCG CGCCGACCAT AGCGAAATAT TAGAAATGAC CGCGACCATG CCGTCAGGCC TTGACGCAGC ACAGCGCGAC GAGATCAAAG CATATGTGCA GGCAGTGTTC AGCGCTCTGG GGCTGGATGT TGGCCTTTAT CATGTTGAAC TGTTGCGCGA TGCCAAAGGG CCCTGTCTAG TGGAGATCAA CGCACGCATG ATGGGTAGCG TAGCGCCGCA GATGTACCGG ATGCTGACCG GCATCGACCC GTTCGAACTG CTAGTCCGTC TGCATCTGGG CGAGCCCATT CTAATTGACG ACTCAGTGCT TCAGCGCGCA GGTAGCGTCG TAACTGTCGC CTCCCGCAAT GGCGGTCATA TCGCCCACGA CTACGACCCC GACACCCTAC AGCCATTACT GGACAAGTAC GCCATCCGGT TTTGCACCGC CCACGTTGCG CCTGGCCAGG CGGTAAACGT CTATAGCGGC AACATCGGCA CAATTGGCCA CGTCATCGTT GAGGACGACT GCCCCCACTC TGCGGCGAAA AAGGGCAATC GCTTCCTACG CGAGCTGTCC TCACTTTACG GCCTTGAACT CGCGACTTAT ACCGGCGCCG AATTGGCTTA A
|
Protein sequence | MKHVVFVDST VSGLLAFEAA KRLGCHVTFI HQRDASFLTI SIKDDTSRLE PYLRYVDAYL RIDNLEGGEF SRLLANLHAE RPIDALISTS EAAIVPVARE AQRIGTLYPR YEALCGAVYK SRLRETLRAH GLRSPDFEVL SEEQLINGVV PSLSLPFVVK PTRGFAKQFS AICHSQTDFD AFLAELRQSR KGADPMIDHL VSRDYLVEQY IDGTLHSAEV IVQDTKVSCF ATTIRFRADH SEILEMTATM PSGLDAAQRD EIKAYVQAVF SALGLDVGLY HVELLRDAKG PCLVEINARM MGSVAPQMYR MLTGIDPFEL LVRLHLGEPI LIDDSVLQRA GSVVTVASRN GGHIAHDYDP DTLQPLLDKY AIRFCTAHVA PGQAVNVYSG NIGTIGHVIV EDDCPHSAAK KGNRFLRELS SLYGLELATY TGAELA
|
| |