Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0714 |
Symbol | |
ID | 1044545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 829624 |
End bp | 830721 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637144107 |
Product | permease |
Protein accession | NP_742875 |
Protein GI | 26987450 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0333328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTCGA GTTTCAAGTT GGACAGCGCC CTTTCGCGGG GCTTGCTCGA TGTGCTCATC AAGGCCGGTC TGGTGGCAGC CTTGGTGATC TTCGCCTTCC AGGTGTTCCA GCCGTTCCTG GAGTTGATGC TGTGGGCGGT GATTCTGGCG GTCACCTTGT ACCCGTTGCA TTGCCGCATC CAGCACCGCA CCGGGCTCAA GCAAGGCTAT GCGGCGACGC TGGTGGTGCT ATTGGTTCTG GTGCTGCTGC TGGTGCCTAT CTACCTGGTG GTGATGTCCA TCGGCGAATC GGTGGACAGC CTGGTGACGC TACTCAAGAG CGGCGCCTGG AGCGTACCGG TCCCGCCTGA TTCCGTGGCG GCCTGGCCAC TGATCGGGCC GAAGGTGCAC GCGCTGTGGT TGGCGGCCTC CGAAAACATG GCCAGTGTAC TGAATCAGTG GATGCCCCAG ATCAAGGGGG CCGGGCTAAC GGTGCTGGGC GCTGCGGCGA GCGCCGGCGG GGCCTTCCTT CTGTTCATCG GCGCAATCAT CATTTCCGGG GTCATCATGG CCTTCGGTGA ACGAGGTGAA ATCGCTACCC AACGCATCGC CATGCGGGTT TCAGGCGCAG AGCGCGGTAA ACCCTTGGCC ACGCTGTGCA CGGCCACCAT TCGCGCGGTG GCGCAAGGGG TGATCGGCAT TGCCTTCATC CAGATGTTGC TGATCGGTGT CGGCTTTGTC GTAAAAGGTG TTCCCGGTGC CGGGATGCTG GCCATCGTCA TCCTCATGCT GGGCATTGCA CAGGCCCCGG CGACGCTGGT GACCTTGCCG GTGATCATTT ATGTGTTCAA CGCCGAAGGC TTCACGGTGG CGACCATCAT TTTTGCCATC TACACCTTCG TCGCCGGCCT TGCCGACAAC GTGCTCAAAC CGCTGCTGCT GGGGCGCGGG GTTGATGTAC CGATGCCGGT GGTACTGATC GGGGCATTAG GTGGCATGGT GGTCAAAGGC ATCATCGGCT TGTTTATCGG CCCGGTAATC CTCGGCGTGA CGTACGTGCT GTTCTGGCAA TGGGTTGCGC TGCAGGTGCC GGAGCAACCG GCACCCCCTG CCGCCTGA
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Protein sequence | MQSSFKLDSA LSRGLLDVLI KAGLVAALVI FAFQVFQPFL ELMLWAVILA VTLYPLHCRI QHRTGLKQGY AATLVVLLVL VLLLVPIYLV VMSIGESVDS LVTLLKSGAW SVPVPPDSVA AWPLIGPKVH ALWLAASENM ASVLNQWMPQ IKGAGLTVLG AAASAGGAFL LFIGAIIISG VIMAFGERGE IATQRIAMRV SGAERGKPLA TLCTATIRAV AQGVIGIAFI QMLLIGVGFV VKGVPGAGML AIVILMLGIA QAPATLVTLP VIIYVFNAEG FTVATIIFAI YTFVAGLADN VLKPLLLGRG VDVPMPVVLI GALGGMVVKG IIGLFIGPVI LGVTYVLFWQ WVALQVPEQP APPAA
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