Gene PP_0703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0703 
Symbol 
ID1044534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp817215 
End bp818165 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content65% 
IMG OID637144096 
Productanti-FecI sigma factor, FecR 
Protein accessionNP_742864 
Protein GI26987439 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.973533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATG GTACGCCCGC ACAGGCGCAG GTCGATCAGG CCATCGACTG GCTGGTGAAG 
CTGCGTTTCG ACACCCCCAG CCCGCGCACC GAGCAGCAGT TTCAACACTG GCTGGCCAGC
CACCCACACA ACCGCCTGGC CTGGCAGCGA GTCAGTAATC TGGGTGATGA ATTGGCCGGG
CTGCCCAAGG ACCTGAGCCG GCGCACCCTG GACGCTAGCC AGCACCCAAA AGCCAGCCGC
AGGGACCACC TGAAGTTGCT GGGGCTGTTG GCCGTGGGCG GCAGCCTGGG CTGGGCCGCG
CGCGAACCGC TAGGCCTGCC ACAGCTGCTG GCCGACACCA GCACTGCCAC AGGCGAACGG
CGCCAATGGC AAGGCAGTGA CGGCAGCCGT CTGCAGCTCA ACACCGCCAG TGCCATCGAC
TTGCACTACA GCGCGGAGCA ACGCCAGCTG AAACTGATCC ATGGCGAGGT CAGCCTGGAG
AGCAACCCCA ACGACAACCG CCCGTTCCAC GTCGCCACCC GTGTCGGCCC GCTGACCACC
TTCGATGGCC AGCTGTTGCT GCGCGAAAAC AGCCAAGGGC TGCTGCTGTC GGTGCGTCGT
GGTGAAGTCA CGCTGTTCCC TGCCTCGGCC TCAGCGAGGC AAGTGCTGCC CGGTGAAACC
TTGCAAGTCA CAGCCGACGG CAGCATTCAG GCCAGAACAC TGCACAACGA CCCCTGGGGT
TGGACCGAAG GTGTACTCAG CGTGCAGCAG ATGCCGCTTG CCGAGTTTGC CAGCGAACTC
GGCCGCTACC GACCGGGCCT GTTGCGCTGC GCTCCAGAAG TGGCGGGCTT GAAGGTTTCA
GGCACCTATC AGTTGGCTGA CACCGGGCAA ATCCTGCAAC TGCTCACCCG CAGCCTGCCC
GTGCGGGTCG AGTACAGGAC ACGCTATTGG GTAAGCATCG GCGCGGCGTA A
 
Protein sequence
MPDGTPAQAQ VDQAIDWLVK LRFDTPSPRT EQQFQHWLAS HPHNRLAWQR VSNLGDELAG 
LPKDLSRRTL DASQHPKASR RDHLKLLGLL AVGGSLGWAA REPLGLPQLL ADTSTATGER
RQWQGSDGSR LQLNTASAID LHYSAEQRQL KLIHGEVSLE SNPNDNRPFH VATRVGPLTT
FDGQLLLREN SQGLLLSVRR GEVTLFPASA SARQVLPGET LQVTADGSIQ ARTLHNDPWG
WTEGVLSVQQ MPLAEFASEL GRYRPGLLRC APEVAGLKVS GTYQLADTGQ ILQLLTRSLP
VRVEYRTRYW VSIGAA