Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0701 |
Symbol | |
ID | 1044532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 814511 |
End bp | 815725 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637144094 |
Product | MFS efflux transporter, putative |
Protein accession | NP_742862 |
Protein GI | 26987437 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCA GTAGTGCCTC CACCGCATCC ACCCCGGCAG CGGCAAGCCA AGCCTCGCCG ATGGTGATGC GTATCATCGG TTTCTGCGCC TTGGCGCACT TGATCAACGA CCTGATCCAA TCGGTGCTGC CCGCGATCTA CCCGATGCTC AAGGCCAACT ACGACCTGAG CTTCGCCCAG ATCGGCATGA TCACGCTCAC GTTCCAGATC ACCGCCTCGC TGTTGCAGCC TTGGGTCGGC TTCTTCACCG ACCGCCGGCC CACGCCAAAT CTGTTGCCGC TAGGCACCCT GTGTACGTTG GTGGGGATCG TGATGCTGGC CTTCGTTGGC AGTTTCCCGA TGATCCTGCT GGCGTCGGCT TTGGTGGGCA TTGGCTCGTC GACCTTCCAC CCGGAAACCT CGCGTATTGC ACGGCTGGCC TCGGGCGGGC GCTTCGGCCT GGCCCAATCG ACCTTCCAGG TCGGTGGCAA CACCGGCTCT GCTCTGGGCC CACTGCTGGC AGCGGCCATC GTCATACCGT TCGGCCAGAC CCATGTGGCC TGGTTCGGCC TGGCAGGGCT GTTCTTCCTC GGCGTTACCC TGATGTTGCG CGGCTGGTAC AAGGAACACC TCAATCAGGC CAAGGCGCGC AAGGCGGTGC AGGCCACTCA CGGCATTTCG CGCAATCGGG TAATCGCGGC GCTGATCGTG CTGGGCTTGC TGGTGTTCTC CAAGTACTTC TACATGGCCA GCTTCACCAG CTACTTTACC TTCTACCTGA TCGAGAAGTT CGGTGTGTCG GTGGCCAGCT CGCAGCTGCA CCTGTTCCTG TTCCTCGGCG CGGTGGCGGC GGGCACCTTC TTTGGCGGGC CGATCGGTGA CCGTATCGGG CGCAAGGCTG TGATCTGGTT TTCGATACTG GGTGTGGCGC CGTTCACGCT GGCGCTGCCG TATGCCGACT TGTTCTGGAC CACGGTGCTG AGCGTGGTGA TCGGCTTTAT CCTGGCTTCG GCGTTTTCCG CGATCGTGGT GTATGCGCAG GAGCTGGTGC CGGGCAGCGT GGGCATGATT GCCGGGATCT TCTTTGGCCT GATGTTCGGT TTTGGCGGCA TTGGCGCTGC GCTGTTGGGG TACGTAGCGG ACCTGCGTGG TATCGAATAC GTGTATGGGT TGTGCTCGTT CCTGCCATTG TTCGGGTTGT TGGCGGTGTT GCTGCCAAGT ACAGGTAAAC GCTGA
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Protein sequence | MATSSASTAS TPAAASQASP MVMRIIGFCA LAHLINDLIQ SVLPAIYPML KANYDLSFAQ IGMITLTFQI TASLLQPWVG FFTDRRPTPN LLPLGTLCTL VGIVMLAFVG SFPMILLASA LVGIGSSTFH PETSRIARLA SGGRFGLAQS TFQVGGNTGS ALGPLLAAAI VIPFGQTHVA WFGLAGLFFL GVTLMLRGWY KEHLNQAKAR KAVQATHGIS RNRVIAALIV LGLLVFSKYF YMASFTSYFT FYLIEKFGVS VASSQLHLFL FLGAVAAGTF FGGPIGDRIG RKAVIWFSIL GVAPFTLALP YADLFWTTVL SVVIGFILAS AFSAIVVYAQ ELVPGSVGMI AGIFFGLMFG FGGIGAALLG YVADLRGIEY VYGLCSFLPL FGLLAVLLPS TGKR
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