Gene PP_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0700 
Symbol 
ID1044530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp813394 
End bp814380 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content63% 
IMG OID637144093 
Productanti-FecI sigma factor, FecR 
Protein accessionNP_742861 
Protein GI26987436 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCTG TCATCGTTAG GCCAAACGGC CCCTATCGTG AGCAGACCGC CCCCATGAGC 
CCGATGTCCG CCAAGCAGCT GCAGCCCGAT CCACAACAGG AAGCGCTGGC GTGGTTTTCG
TTGCTGCGCC AGCCCGGTTG CGACGAAACC CAGCGCCAGG CATTTGCAGC CTGGTGCCAG
GTACAAGAGA ACGCCCACGC CTACGCCGAG CTGGAGACGT TCTGGCAACA GCTGCAACCC
GCACCTGCCC GCCCTCGCCC ACGGCATGTC ACTGTCCGTC GCAGTCACCT GGGTAAAGGG
TTGGCGCTTG CGTTTTTGCT AGGGTTAGCC GCTGCAGCTT ACCTGTACTG GCCGCTGATG
CAGCGTCTGG CCAGCGAGCT GCACACCGAT GTGGGAGAGC GCCGCAGCAT ACGCTTGGCG
GATGGCACGA CATTGAACCT GGACAGCGCC AGCGCGATGA ACGTCGACCT GCGCGGCCGC
ACCCGCCAAC TGCACCTGGT GCAGGGCCAG GTGCATCTGG AAGTCGTGCT CGACGGGCGC
GCCATGGACG TGGAAGTGGG CAACGCACGC ATCCAGGTAT ACGGCACTCG CCTGCAGATA
GCCCGCCATG CAGGGCGCGA CGAACTCGTG GTATTCAGTG GCAAGGCCAT GGTCACCCAG
GGGGGTGAGC AGCGGATGGT CTCGGCGGGT GAGCGGGTAA CCTTCGATGA CACACGCATC
GACCCGGTGC GTAAGGCTGA TCTGAAAACC GCTGACAGTT GGCGCAATGG CCGCCTGAAA
GCCACAGACA TGCCATTGAG GCAGGTGCTG GAGCGCCTTG CCGGTTACCA AGGGCAGCGT
CTGTGGATGA TGGATGAACA AGTGGCTCAT CGCCGTGTAA GCGGCGACTT CAACCTCGAC
CAGCCTGGCC AAAGCCTGCA ATCCCTGGCT GCAGCCCAGC AGTTGCAGTT GCTGGGCGTG
CTCGGGCACT GGCTTGTGGT GCGCTGA
 
Protein sequence
MTPVIVRPNG PYREQTAPMS PMSAKQLQPD PQQEALAWFS LLRQPGCDET QRQAFAAWCQ 
VQENAHAYAE LETFWQQLQP APARPRPRHV TVRRSHLGKG LALAFLLGLA AAAYLYWPLM
QRLASELHTD VGERRSIRLA DGTTLNLDSA SAMNVDLRGR TRQLHLVQGQ VHLEVVLDGR
AMDVEVGNAR IQVYGTRLQI ARHAGRDELV VFSGKAMVTQ GGEQRMVSAG ERVTFDDTRI
DPVRKADLKT ADSWRNGRLK ATDMPLRQVL ERLAGYQGQR LWMMDEQVAH RRVSGDFNLD
QPGQSLQSLA AAQQLQLLGV LGHWLVVR