Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0698 |
Symbol | |
ID | 1044528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 811332 |
End bp | 812249 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637144090 |
Product | LysR family transcriptional regulator |
Protein accession | NP_742859 |
Protein GI | 26987434 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.587126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGC CGCCACTCAA CGCCTTCCGC TACTTCGACA TTGCCGCCCA GACCGAGAGC TTCGTGCGCG CCGCCGAGCA CTTGCACGTC ACTCACGGCG CGGTCAGCCG CCAAATACGC CTGCTGGAAG AAAGCCTTGG CGTGGAACTG TTCGAACGCC GCAACCGGGC CATTTTCCTC ACCCCCGCCG GTCGTGCCCT GCAAGGCACC ACCCAGGCGA TCTTCGAACA GCTCGAAGGC GCCGTGCAGC GCCTGCAGCA ACAAGCTCGC GACAATGTGC TGGTGCTGTC TTGCGAACCG ACCATCGCCA TGCGCTGGCT GATCCCGCGC CTGCCGCGCT TCCATGCCAC CCACCCCGAC CTTCAGTTGC ACCTGGTAGC CGCAGGCGGC CCGCTGGACT TCGCGCGCAG CGGTGTCGAC CTGGCAATTC GCCGCGACGA CTTCCACTGG GACAACCAGC TGTACAGCCA GAAAATCTGC GATGAATGGA TCGGCCCGGT GTGCCACCCC GCCGCCTGCG CCAGACTCGA TGGCCAACGG CTGCTGCACA GCACCACACG TCCTGCTGCC TGGCCCACCT GGCTGCGCCT GAGCGGCCAA CAGGCGCGGC ACTGCGAACG CAGCGACTAC GAACATTTCT ACCTGTCGAT TCAGGCCGCC AGCGCCGGAC TGGGCCTGGC CATTGCCTCA GCCCTGATGG TGCGCGACGA ACTCGACAGC GGGCAGCTGC AGGCGCCGTT CGGTTTTGTG CGCGATGGCT CGGCCTACCA CCTGCTCAGC CCGCAGCCTC TGGCCGACAG CGGCAAGCGC CAGCGCTTCG CCGAGTGGAT AATGGACGAA TGCCGGAAGT GCCTGGCTCA TTTGGGGTTG ATACAGAACG ACGCCCCCGC ACCGCCATCA CCACCCCAGG TGCGATAA
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Protein sequence | MKLPPLNAFR YFDIAAQTES FVRAAEHLHV THGAVSRQIR LLEESLGVEL FERRNRAIFL TPAGRALQGT TQAIFEQLEG AVQRLQQQAR DNVLVLSCEP TIAMRWLIPR LPRFHATHPD LQLHLVAAGG PLDFARSGVD LAIRRDDFHW DNQLYSQKIC DEWIGPVCHP AACARLDGQR LLHSTTRPAA WPTWLRLSGQ QARHCERSDY EHFYLSIQAA SAGLGLAIAS ALMVRDELDS GQLQAPFGFV RDGSAYHLLS PQPLADSGKR QRFAEWIMDE CRKCLAHLGL IQNDAPAPPS PPQVR
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