Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0678 |
Symbol | |
ID | 1044504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 791193 |
End bp | 793055 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637144070 |
Product | hypothetical protein |
Protein accession | NP_742839 |
Protein GI | 26987414 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.760375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCGATA TGCTCAAACG CCTCGCTGCC CTGGCGCTGT GTGCCTGCGC CCCTGTTCAT GCCGCCCCCA TGCTGGATCC AGGCCGTCTC CAGCAATTGG CCAATACCCC CTACTGGCTC GCCATTGGAC ATTACGAAAC CGCCAAGCTC GGCGGCTGGC GCAGCTATGT GGATGATGAT GCGTTCTTCC TCGCCGAAGA TGGCGCGCAC CATCCGGACC AGGAACTCAA GGCTACGGTC GCTGCGCTGT ATGCCCCGGC CAGCCTCGGT GACAAGCACG CCCAGTGCGT ATTCCCCGCT CGCACCCGCT GGCTGCGCGA ACAGCTCGAC CTGCAAGACT TGCCACAACC GGACTGCCAG GAATTCAAGA CCTGGTACCA GTCGATCGAC CCGCACAGCG CCGCGTTGAT CTTCCCGGCA GCCTACCTGA ACAGCCCGTC GTCGATGTTC GGGCACACCC TGCTGCGCAT CGACCAGTCC AACACCCGCA GCGACGACAC CACGCTGCTG AGCTACGCCA TCAACTTCGG TGCCTATATC GAAGGCAGCG ACAACAGCAT CCTGTACGCC TGGAAAGGCC TGATGGGCGG CTACCCGGGG CTGTTCGCGC TGATGCCCTA CCAGGAAAAA CTCTCCGAAT ACCGCAGCCT GGAAAACCGC GACCTGTGGG AATACCAGCT GGACCTGACC CCCGAAGAAA CCGGACGTAT GGTCGAGCAT GTGTGGGAGC TGAAGCAGAT CCAGTTCGAC TACTTCTTCT TCGACGAAAA CTGCTCGTAT CGCCTGCTGG AGCTGCTGCA AGTGGCCCGG CCGAGCCTGG ACCTGACGTC TCAGTTCCCG CTGACCGCCA TTCCCACCGA CACGGTGAAG GCCGTGAAGC AGTCCGGGCT GGTCGCCAGC GAAACTTACC GCCCCTCTCG CGAACGTGAA TTGCTGGCCA GGGCCGAGCC ACTCGACCAC GACGAAAAGC GCCAGGTGCT GGCTGTAAGC GCCGACACTG CGCAATTGCA AAGCCCAGAA TTCCAGGCCC TGCCTCGCGA ACGCCAAGCG TTGGTGCAAG ATGCCGCGTA TCGCCTTGAG CGGTATCGGG CCAACGGCCA GGAACGCGAC CCAGGGCAAG CCAAACGCAG CTTCGAGTTG CTGCGGGCGA TCAACAGCAA CCCGCCGCCG CCCCTGCAGA TCGAGCGCCC CGGCCTGCCC GAAGATGGCC ATGACTCGCG CACCTGGCAA CTGGGCGTGG GCACCCGTGA AGACCGCGCC TACGCCGAAT ATGGCTTGCG CATGGCCTAC CACGACCTGA ATGACAACGC CTATGGCTTC CCGCTGGGCG CACAGATCGA AATCCTGCAA TTGAAGCTGC GCCAGTATGA AGGCAACGAT TGGCAGGTGC AGCGCCTGGA CCTGGCCACC ATCCGTTCAC TGACACCCCG TAACGAGCTG CTCAAGCCTT GGTCATGGCA AGTGGCCGGC GGGCTGGAGC GGGTGCCGGG CAAGCATGAT GACGAAGTGC TGGTGAGCCA TGTGAATGGC GGCGCTGGCG GCACCTGGCA GCTGGCCGAC GGTTTGCTGG GGTTTGCCTT GGGCACGGTG CGGGTCGAGC ATCACAACGA CTTCGCTCAG TTCATTGCCC CGGCAGCTGG CTTCAATGGC GGGCTGCTGT GGCGCAACGG GCTGGGCAAC ATGACGCTGG AGGCCAAGGG CGATTACTTC ACCAACGGCG AAGTGCGGCG CAGTGTAAGC CTGAACCAGC AGTGGGAAAT CAGCCAGAAC CTTGGTCTTC GGTTGAGCGC CTCGCGTGAG TTCAGCCACC TGGCCACGGC ACAGAACGAG GTGATGCTCG AGCTGAAGTG GTATCACTAC TGA
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Protein sequence | MPDMLKRLAA LALCACAPVH AAPMLDPGRL QQLANTPYWL AIGHYETAKL GGWRSYVDDD AFFLAEDGAH HPDQELKATV AALYAPASLG DKHAQCVFPA RTRWLREQLD LQDLPQPDCQ EFKTWYQSID PHSAALIFPA AYLNSPSSMF GHTLLRIDQS NTRSDDTTLL SYAINFGAYI EGSDNSILYA WKGLMGGYPG LFALMPYQEK LSEYRSLENR DLWEYQLDLT PEETGRMVEH VWELKQIQFD YFFFDENCSY RLLELLQVAR PSLDLTSQFP LTAIPTDTVK AVKQSGLVAS ETYRPSRERE LLARAEPLDH DEKRQVLAVS ADTAQLQSPE FQALPRERQA LVQDAAYRLE RYRANGQERD PGQAKRSFEL LRAINSNPPP PLQIERPGLP EDGHDSRTWQ LGVGTREDRA YAEYGLRMAY HDLNDNAYGF PLGAQIEILQ LKLRQYEGND WQVQRLDLAT IRSLTPRNEL LKPWSWQVAG GLERVPGKHD DEVLVSHVNG GAGGTWQLAD GLLGFALGTV RVEHHNDFAQ FIAPAAGFNG GLLWRNGLGN MTLEAKGDYF TNGEVRRSVS LNQQWEISQN LGLRLSASRE FSHLATAQNE VMLELKWYHY
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