Gene PP_0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0678 
Symbol 
ID1044504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp791193 
End bp793055 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content63% 
IMG OID637144070 
Producthypothetical protein 
Protein accessionNP_742839 
Protein GI26987414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.760375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCGATA TGCTCAAACG CCTCGCTGCC CTGGCGCTGT GTGCCTGCGC CCCTGTTCAT 
GCCGCCCCCA TGCTGGATCC AGGCCGTCTC CAGCAATTGG CCAATACCCC CTACTGGCTC
GCCATTGGAC ATTACGAAAC CGCCAAGCTC GGCGGCTGGC GCAGCTATGT GGATGATGAT
GCGTTCTTCC TCGCCGAAGA TGGCGCGCAC CATCCGGACC AGGAACTCAA GGCTACGGTC
GCTGCGCTGT ATGCCCCGGC CAGCCTCGGT GACAAGCACG CCCAGTGCGT ATTCCCCGCT
CGCACCCGCT GGCTGCGCGA ACAGCTCGAC CTGCAAGACT TGCCACAACC GGACTGCCAG
GAATTCAAGA CCTGGTACCA GTCGATCGAC CCGCACAGCG CCGCGTTGAT CTTCCCGGCA
GCCTACCTGA ACAGCCCGTC GTCGATGTTC GGGCACACCC TGCTGCGCAT CGACCAGTCC
AACACCCGCA GCGACGACAC CACGCTGCTG AGCTACGCCA TCAACTTCGG TGCCTATATC
GAAGGCAGCG ACAACAGCAT CCTGTACGCC TGGAAAGGCC TGATGGGCGG CTACCCGGGG
CTGTTCGCGC TGATGCCCTA CCAGGAAAAA CTCTCCGAAT ACCGCAGCCT GGAAAACCGC
GACCTGTGGG AATACCAGCT GGACCTGACC CCCGAAGAAA CCGGACGTAT GGTCGAGCAT
GTGTGGGAGC TGAAGCAGAT CCAGTTCGAC TACTTCTTCT TCGACGAAAA CTGCTCGTAT
CGCCTGCTGG AGCTGCTGCA AGTGGCCCGG CCGAGCCTGG ACCTGACGTC TCAGTTCCCG
CTGACCGCCA TTCCCACCGA CACGGTGAAG GCCGTGAAGC AGTCCGGGCT GGTCGCCAGC
GAAACTTACC GCCCCTCTCG CGAACGTGAA TTGCTGGCCA GGGCCGAGCC ACTCGACCAC
GACGAAAAGC GCCAGGTGCT GGCTGTAAGC GCCGACACTG CGCAATTGCA AAGCCCAGAA
TTCCAGGCCC TGCCTCGCGA ACGCCAAGCG TTGGTGCAAG ATGCCGCGTA TCGCCTTGAG
CGGTATCGGG CCAACGGCCA GGAACGCGAC CCAGGGCAAG CCAAACGCAG CTTCGAGTTG
CTGCGGGCGA TCAACAGCAA CCCGCCGCCG CCCCTGCAGA TCGAGCGCCC CGGCCTGCCC
GAAGATGGCC ATGACTCGCG CACCTGGCAA CTGGGCGTGG GCACCCGTGA AGACCGCGCC
TACGCCGAAT ATGGCTTGCG CATGGCCTAC CACGACCTGA ATGACAACGC CTATGGCTTC
CCGCTGGGCG CACAGATCGA AATCCTGCAA TTGAAGCTGC GCCAGTATGA AGGCAACGAT
TGGCAGGTGC AGCGCCTGGA CCTGGCCACC ATCCGTTCAC TGACACCCCG TAACGAGCTG
CTCAAGCCTT GGTCATGGCA AGTGGCCGGC GGGCTGGAGC GGGTGCCGGG CAAGCATGAT
GACGAAGTGC TGGTGAGCCA TGTGAATGGC GGCGCTGGCG GCACCTGGCA GCTGGCCGAC
GGTTTGCTGG GGTTTGCCTT GGGCACGGTG CGGGTCGAGC ATCACAACGA CTTCGCTCAG
TTCATTGCCC CGGCAGCTGG CTTCAATGGC GGGCTGCTGT GGCGCAACGG GCTGGGCAAC
ATGACGCTGG AGGCCAAGGG CGATTACTTC ACCAACGGCG AAGTGCGGCG CAGTGTAAGC
CTGAACCAGC AGTGGGAAAT CAGCCAGAAC CTTGGTCTTC GGTTGAGCGC CTCGCGTGAG
TTCAGCCACC TGGCCACGGC ACAGAACGAG GTGATGCTCG AGCTGAAGTG GTATCACTAC
TGA
 
Protein sequence
MPDMLKRLAA LALCACAPVH AAPMLDPGRL QQLANTPYWL AIGHYETAKL GGWRSYVDDD 
AFFLAEDGAH HPDQELKATV AALYAPASLG DKHAQCVFPA RTRWLREQLD LQDLPQPDCQ
EFKTWYQSID PHSAALIFPA AYLNSPSSMF GHTLLRIDQS NTRSDDTTLL SYAINFGAYI
EGSDNSILYA WKGLMGGYPG LFALMPYQEK LSEYRSLENR DLWEYQLDLT PEETGRMVEH
VWELKQIQFD YFFFDENCSY RLLELLQVAR PSLDLTSQFP LTAIPTDTVK AVKQSGLVAS
ETYRPSRERE LLARAEPLDH DEKRQVLAVS ADTAQLQSPE FQALPRERQA LVQDAAYRLE
RYRANGQERD PGQAKRSFEL LRAINSNPPP PLQIERPGLP EDGHDSRTWQ LGVGTREDRA
YAEYGLRMAY HDLNDNAYGF PLGAQIEILQ LKLRQYEGND WQVQRLDLAT IRSLTPRNEL
LKPWSWQVAG GLERVPGKHD DEVLVSHVNG GAGGTWQLAD GLLGFALGTV RVEHHNDFAQ
FIAPAAGFNG GLLWRNGLGN MTLEAKGDYF TNGEVRRSVS LNQQWEISQN LGLRLSASRE
FSHLATAQNE VMLELKWYHY