Gene PP_0658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0658 
Symbol 
ID1044482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp765404 
End bp766339 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content65% 
IMG OID637144050 
Producthomocysteine S-methyltransferase family protein 
Protein accessionNP_742819 
Protein GI26987394 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.778946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTA CTCATAAGAA CCTTCAGAGA AGTTATATGG CAGAGCGAAC GATGGTAATT 
CTGGACGGTG GCATGGGCCG AGAGCTGCAG CGCAGCGGTG CACCGTTTCG CCAGCCCGAG
TGGTCGGCGC TGGCGCTGAG CGAGGCGCCG GAGGCGGTCG TGGGCGTGCA CGCAGCCTTC
ATCGATGCGG GTGCGCAGGT CATCACCAGC AACAGCTATG CAGTAGTGCC GTTCCACATC
GGTGAAGAAC GCTTTGCCGC CGAAGGGCGA CAGCTGGCCC ATATCGCAGG CCAGCTTGCG
CGGCACGCGG CAGATAGCGG CGCGCACCCG GTCAGGGTGG CAGGTTCGCT GCCGCCGCTG
TTCGGGTCCT ACCGGCCCGA CCTGTTCCAG CCCGAGCGTG TGGCAGAGGT GCTGACCCCG
TTGCTCCAGG GCCTGGCCCC GCATGTTGAC CTGTGGCTGG CCGAAACCCA GAGTTCCGTG
GCCGAAGTGC GAGCCATTCA TAGCCATTTG CCGGCAGACG GCAGGCCGTT CTGGGTGTCC
TTCACCCTGC AGGACGAGGA AGTCGACGAG GTTCCGCGCC TGCGTTCCGG TGAACCGGTG
GCCGAAGCCA TCGAAGCCGC AGTCGGCCTG GGTGTGGCTG CGGTGTTATT TAACTGCAGC
CAGCCGGAGG TGATCGGCGC CGCCATTGAT GTCGCGCGCT CGGTCATCGA GCGACACAAC
GCCGAGATTG CCATCGGTGC CTATGCCAAC GCCTTCCCGC CGCAGCCCAA AGAAGCCACT
GCCAACGATG GCCTGGACGA ACTGCGCGAA GACCTCGATC CGCCGGGTTA CCTGGCATGG
GCCAAGGACT GGCGTGCGCG GGGTGCCAGC ATGGTCGGCG GTTGCTGTGG CATCGGCCCG
GAGCACATCG CCGAGCTGAA ACGCAACCTG GCCTAA
 
Protein sequence
MNFTHKNLQR SYMAERTMVI LDGGMGRELQ RSGAPFRQPE WSALALSEAP EAVVGVHAAF 
IDAGAQVITS NSYAVVPFHI GEERFAAEGR QLAHIAGQLA RHAADSGAHP VRVAGSLPPL
FGSYRPDLFQ PERVAEVLTP LLQGLAPHVD LWLAETQSSV AEVRAIHSHL PADGRPFWVS
FTLQDEEVDE VPRLRSGEPV AEAIEAAVGL GVAAVLFNCS QPEVIGAAID VARSVIERHN
AEIAIGAYAN AFPPQPKEAT ANDGLDELRE DLDPPGYLAW AKDWRARGAS MVGGCCGIGP
EHIAELKRNL A