| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0625 |
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| Symbol | clpB |
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| ID | 1044444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 730459 |
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| End bp | 733023 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637144011 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit ClpB |
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| Protein accession | NP_742786 |
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| Protein GI | 26987361 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0977659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATAG ACCGTTTAAC CAGCAAGCTG CAACTTGCAA TATCCGATGC CCAGTCTTTG
GCCGTTGGCA TGGACCACCC TGCCATCGAG CCCGTGCACC TGTTACAGGC GCTGCTCGAA
CAGCAGGGCG GCTCCATCAA ACCGCTGCTG ATGCAGGTAG GCTTCGACAT CAATGGCCTG
CGCCAGGGGC TGGTGAAAGA GCTCGACCAA CTGCCGAAAA TACAGAACCC TACCGGCGAC
GTGAACATGT CGCAGGACTT GGCACGTCTG CTTAACCAGG CAGACCGCCT GGCACAGCAG
AAGGGCGACC AGTTCATTTC CAGCGAGCTG GTGCTGTTGG CCGCCATGGA CGAAAACAGC
AAGCTCGGCA AGCTGCTGCT GAGCCAGGGC GTGAGCAAGA AAGCGCTGGA AAATGCCATC
AACAACCTGC GTGGCGGCGC GGCAGTGAAT GACGCCAACG CCGAGGAATC GCGCCAGGCG
CTGGACAAAT ACACCGTCGA CCTGACCAAG CGTGCCGAAG AGGGCAAGCT GGACCCGGTC
ATTGGCCGTG ACGATGAAAT CCGCCGTACC GTGCAGGTGC TGCAACGCCG TACCAAGAAC
AACCCGGTGC TGATCGGTGA GCCTGGCGTG GGTAAAACCG CCATCGCCGA AGGCCTGGCC
CAGCGCATCA TCAATGGTGA AGTGCCCGAC GGCCTCAAAG GCAAGCGCCT GTTGGCGCTG
GACATGGGCG CGCTAATTGC CGGTGCCAAG TACCGCGGTG AGTTCGAAGA GCGCTTGAAA
AGCCTGCTGA ACGAACTGTC CAAGCAGGAA GGCCAGATCA TCCTGTTCAT CGACGAACTG
CACACCATGG TCGGCGCCGG CAAAGGCGAG GGCGCCATGG ACGCCGGCAA CATGCTCAAG
CCGGCCCTGG CCCGCGGCGA GCTGCATTGC GTAGGTGCCA CCACGCTGAA CGAGTACCGC
CAGTTCATCG AAAAGGACGC CGCCCTGGAG CGCCGTTTCC AGAAGGTGCT GGTCGAGGAG
CCGAGCGAGG AAGACACCAT CGCCATCCTG CGTGGCCTGA AAGAGCGCTA TGAAGTGCAC
CACAAGGTGG CCATCACCGA CGGTGCAATC ATCGCTGCGG CCAAGCTCAG CCATCGCTAC
ATCACCGACC GCCAGCTGCC GGACAAGGCC ATTGACCTGA TCGACGAAGC GGCCAGCCGC
ATCCGCATGG AGATCGACTC CAAGCCGGAA GTGCTCGACC GCCTTGATCG CCGCCTGATC
CAGCTGAAGG TGGAGTCGCA GGCGCTGAAG AAAGAAGAAG ACGAAGCGGC GAAAAAGCGC
CTGGAGAAGC TGACCGAGGA AATCGAGCGG CTGGAGCGTG AGTATTCCGA CCTGGAAGAA
ATCTGGGCTT CGGAGAAAGC TGAAGTGCAG GGCTCGGCGC AGATCCAGCA AAAGATCGAG
CAGTCTCGCC AGGAGCTGGA AGCCGCCCGT CGCAAAGGCG ACCTGAACCG CATGGCCGAA
CTGCAGTACG GGGTGATCCC GGACCTGGAG CGCAGCCTGC AGATGGTCGA CCAGCACGGC
AAGACCGACA ACCAGTTGCT GCGCAACAAG GTCACCGAGG AAGAAATTGC CGAAGTGGTA
TCGAAATGGA CCGGCATTCC TGTGGCCAAG ATGCTCGAAG GCGAGCGTGA GAAGCTGCTG
AAGATGGAAG AGCTGCTGCA CCAGCGCGTG ATTGGCCAGA GCGAGGCGGT AACCGCCGTA
GCCAACGCCG TACGCCGCTC GCGTGCCGGG CTGTCCGACC CGAACCGGCC AAGTGGTTCG
TTCCTGTTCC TCGGCCCGAC CGGTGTGGGC AAGACCGAAC TGTGCAAGGC GCTGGCCGAG
TTCCTGTTCG ACACCGAAGA GGCGATGGTG CGCATCGACA TGTCCGAATT CATGGAGAAG
CACTCCGTCG CGCGCCTGAT CGGTGCACCA CCAGGCTATG TAGGGTATGA AGAGGGCGGT
TACCTGACCG AGGCCGTGCG GCGCAAGCCT TACTCGGTGG TGCTGCTGGA CGAGGTGGAA
AAAGCCCACC CGGATGTGTT CAACGTGCTG TTGCAGGTGC TGGAAGACGG CCGCCTGACC
GACAGCCACG GGCGCACCGT GGACTTCCGC AACACCGTGA TCGTGATGAC CTCCAACCTG
GGCTCGGCGC AGATTCAGGA ACTGGTGGGT GACCGCGAGG CACAGCGTGC GGCAGTGATG
GATGCGGTGG GGGCGCACTT CCGTCCGGAA TTCATCAACC GCATCGACGA AGTGGTGGTG
TTCGAGCCTT TGGGCCGCGA GCAGATTGCC GGTATTACAG AAATCCAGCT CGGCCGCCTG
CGCAGCCGCC TGCTGGAGCG CGAACTGTCG TTGAGCCTGA GCCCAGAGGC GTTGGACAAG
CTGATTGCCG TGGGTTATGA CCCGGTGTAC GGCGCGCGGC CGCTGAAGCG TGCGATCCAG
CGCTGGATCG AGAACCCGCT GGCGCAGCTG ATTCTGGCCG GCAAGTTCCT GCCCGGTACG
GCGATCACCG CCAAGGTGGA AGGCGACGAA ATCGTCTTTG GCTGA
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| Protein sequence | MRIDRLTSKL QLAISDAQSL AVGMDHPAIE PVHLLQALLE QQGGSIKPLL MQVGFDINGL
RQGLVKELDQ LPKIQNPTGD VNMSQDLARL LNQADRLAQQ KGDQFISSEL VLLAAMDENS
KLGKLLLSQG VSKKALENAI NNLRGGAAVN DANAEESRQA LDKYTVDLTK RAEEGKLDPV
IGRDDEIRRT VQVLQRRTKN NPVLIGEPGV GKTAIAEGLA QRIINGEVPD GLKGKRLLAL
DMGALIAGAK YRGEFEERLK SLLNELSKQE GQIILFIDEL HTMVGAGKGE GAMDAGNMLK
PALARGELHC VGATTLNEYR QFIEKDAALE RRFQKVLVEE PSEEDTIAIL RGLKERYEVH
HKVAITDGAI IAAAKLSHRY ITDRQLPDKA IDLIDEAASR IRMEIDSKPE VLDRLDRRLI
QLKVESQALK KEEDEAAKKR LEKLTEEIER LEREYSDLEE IWASEKAEVQ GSAQIQQKIE
QSRQELEAAR RKGDLNRMAE LQYGVIPDLE RSLQMVDQHG KTDNQLLRNK VTEEEIAEVV
SKWTGIPVAK MLEGEREKLL KMEELLHQRV IGQSEAVTAV ANAVRRSRAG LSDPNRPSGS
FLFLGPTGVG KTELCKALAE FLFDTEEAMV RIDMSEFMEK HSVARLIGAP PGYVGYEEGG
YLTEAVRRKP YSVVLLDEVE KAHPDVFNVL LQVLEDGRLT DSHGRTVDFR NTVIVMTSNL
GSAQIQELVG DREAQRAAVM DAVGAHFRPE FINRIDEVVV FEPLGREQIA GITEIQLGRL
RSRLLERELS LSLSPEALDK LIAVGYDPVY GARPLKRAIQ RWIENPLAQL ILAGKFLPGT
AITAKVEGDE IVFG
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