Gene PP_0619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0619 
Symbol 
ID1044436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp724694 
End bp725896 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content65% 
IMG OID637144006 
Productbranched-chain amino acid ABC transporter, periplasmic amino acid-binding protein 
Protein accessionNP_742781 
Protein GI26987356 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGAC GTACCCTGCT CAAGGCAGGC CTTGCCCTGG GTGCCTTAGG TAGCCTCCCC 
TTGGGGGCAC ACCGGGCATT CGCCGACCAA CCGCTGACCT TCTATGGGCT CAAGTCCATG
TCGGGCGCCT TCGCCAGCTA CGGCAAGTAC GCCGACATGG GCTCGCGCCT GGCCATCGCC
GAGCACCCGC AGTTGCTCGG CCACCCGCTC AAGTACAAAG TCATCGACAC CGAAGGCAAC
GCCGGCAAGG CGGTGCGCAA GGTGCAGGAA GCCATCGGCC AGGATGGTGC ACGCTTCTTC
CAGGGGTGCA CCCTGTCGTC TTCGGCACTG GCAGTGTCCA AGGAAATCCA CAAAGCCGGC
GGCGTGTTCA TGACGCCTGT GGGCGCCGAC GAAATCACCG GCAAGGACTG CAATGCCTCA
ACCTTCCGCT GGTCGGTGCC CACCTATGGT GCCATCCGCG AAACCCTGGT GCCGATGAGC
CGCCAGCTGC CCCAGGCCAA GCGCTGGTAC ACCATCACCC CGCAATACGT ATTCGGCGAT
GCCCTGCTGG ACAACGCCCG CAAAGTGTTC GCCGAGCTCG GCGTGGAACA CATCGGCAAC
AGCTACCACT CGCTGCAGGA GCAGGAATTT TCCGGCTACC TGACCAACGC CATCGCCGCC
AAGCCCGACG TGCTGGTGCT GCTCAACTTC GGTAGCCAGG CCTCCAACGC CCTGCGCCAG
GCGGTCAACT TCGGCATCAA GGACCGCATG AAAGTGCTGA TGGTGTGGTC TGCCGGCCTC
GACCAGTTCC AGGAGCTGGG CAGCGACGTG CTCGAGGGCG TGTACCTGGG TGCGCAGTAC
TGGCACCAGG TCGACACCCC GCTGAACAAG CTGTTGGTCG CCGCCACCCG CAAGGCCTAT
GGCATCAACC CCAACTATCC GCTGGCCGCC GACTACATCG GCACCAAGGT GATGCTCGAA
GCCATCGTCA AGGCCGGCAG CCTGGACGGG GCCGCCGTGT CTGCGGCATT GCAGGGCATG
CGCTTCCAGG GCCCGACCGG CGAAGAACTG ATCCGCCCGG GTGACCACCA GGTGCTCAAG
GACTACTACC TGCTGCGCGG CAAGCCCCAG GGGCAGATGC GCGACGAGGA CGACCTGGCC
GAAGTCATCA GTTCGGGCCG CTCGTTCGTC GAGGTCGATC ACACCGGTTG CGCCCTGGCC
TGA
 
Protein sequence
MQRRTLLKAG LALGALGSLP LGAHRAFADQ PLTFYGLKSM SGAFASYGKY ADMGSRLAIA 
EHPQLLGHPL KYKVIDTEGN AGKAVRKVQE AIGQDGARFF QGCTLSSSAL AVSKEIHKAG
GVFMTPVGAD EITGKDCNAS TFRWSVPTYG AIRETLVPMS RQLPQAKRWY TITPQYVFGD
ALLDNARKVF AELGVEHIGN SYHSLQEQEF SGYLTNAIAA KPDVLVLLNF GSQASNALRQ
AVNFGIKDRM KVLMVWSAGL DQFQELGSDV LEGVYLGAQY WHQVDTPLNK LLVAATRKAY
GINPNYPLAA DYIGTKVMLE AIVKAGSLDG AAVSAALQGM RFQGPTGEEL IRPGDHQVLK
DYYLLRGKPQ GQMRDEDDLA EVISSGRSFV EVDHTGCALA