Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0619 |
Symbol | |
ID | 1044436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 724694 |
End bp | 725896 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637144006 |
Product | branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein |
Protein accession | NP_742781 |
Protein GI | 26987356 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAGAC GTACCCTGCT CAAGGCAGGC CTTGCCCTGG GTGCCTTAGG TAGCCTCCCC TTGGGGGCAC ACCGGGCATT CGCCGACCAA CCGCTGACCT TCTATGGGCT CAAGTCCATG TCGGGCGCCT TCGCCAGCTA CGGCAAGTAC GCCGACATGG GCTCGCGCCT GGCCATCGCC GAGCACCCGC AGTTGCTCGG CCACCCGCTC AAGTACAAAG TCATCGACAC CGAAGGCAAC GCCGGCAAGG CGGTGCGCAA GGTGCAGGAA GCCATCGGCC AGGATGGTGC ACGCTTCTTC CAGGGGTGCA CCCTGTCGTC TTCGGCACTG GCAGTGTCCA AGGAAATCCA CAAAGCCGGC GGCGTGTTCA TGACGCCTGT GGGCGCCGAC GAAATCACCG GCAAGGACTG CAATGCCTCA ACCTTCCGCT GGTCGGTGCC CACCTATGGT GCCATCCGCG AAACCCTGGT GCCGATGAGC CGCCAGCTGC CCCAGGCCAA GCGCTGGTAC ACCATCACCC CGCAATACGT ATTCGGCGAT GCCCTGCTGG ACAACGCCCG CAAAGTGTTC GCCGAGCTCG GCGTGGAACA CATCGGCAAC AGCTACCACT CGCTGCAGGA GCAGGAATTT TCCGGCTACC TGACCAACGC CATCGCCGCC AAGCCCGACG TGCTGGTGCT GCTCAACTTC GGTAGCCAGG CCTCCAACGC CCTGCGCCAG GCGGTCAACT TCGGCATCAA GGACCGCATG AAAGTGCTGA TGGTGTGGTC TGCCGGCCTC GACCAGTTCC AGGAGCTGGG CAGCGACGTG CTCGAGGGCG TGTACCTGGG TGCGCAGTAC TGGCACCAGG TCGACACCCC GCTGAACAAG CTGTTGGTCG CCGCCACCCG CAAGGCCTAT GGCATCAACC CCAACTATCC GCTGGCCGCC GACTACATCG GCACCAAGGT GATGCTCGAA GCCATCGTCA AGGCCGGCAG CCTGGACGGG GCCGCCGTGT CTGCGGCATT GCAGGGCATG CGCTTCCAGG GCCCGACCGG CGAAGAACTG ATCCGCCCGG GTGACCACCA GGTGCTCAAG GACTACTACC TGCTGCGCGG CAAGCCCCAG GGGCAGATGC GCGACGAGGA CGACCTGGCC GAAGTCATCA GTTCGGGCCG CTCGTTCGTC GAGGTCGATC ACACCGGTTG CGCCCTGGCC TGA
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Protein sequence | MQRRTLLKAG LALGALGSLP LGAHRAFADQ PLTFYGLKSM SGAFASYGKY ADMGSRLAIA EHPQLLGHPL KYKVIDTEGN AGKAVRKVQE AIGQDGARFF QGCTLSSSAL AVSKEIHKAG GVFMTPVGAD EITGKDCNAS TFRWSVPTYG AIRETLVPMS RQLPQAKRWY TITPQYVFGD ALLDNARKVF AELGVEHIGN SYHSLQEQEF SGYLTNAIAA KPDVLVLLNF GSQASNALRQ AVNFGIKDRM KVLMVWSAGL DQFQELGSDV LEGVYLGAQY WHQVDTPLNK LLVAATRKAY GINPNYPLAA DYIGTKVMLE AIVKAGSLDG AAVSAALQGM RFQGPTGEEL IRPGDHQVLK DYYLLRGKPQ GQMRDEDDLA EVISSGRSFV EVDHTGCALA
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