Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0616 |
Symbol | |
ID | 1044433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 721995 |
End bp | 722747 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637144003 |
Product | branched chain amino acid ABC transporter ATP-binding protein |
Protein accession | NP_742778 |
Protein GI | 26987353 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACT ACCTCCTGGA AACCCGCCAC CTGGAGCTGG CCTACGGGCC GTTCAAGGCG GTCGCGGGCG TTGACCTCAA AGTGCGAGCC GGCACCATCC ACACCATCAT CGGCCCCAAC GGCGCCGGCA AGACCAGCCT GTTCCACTGC CTGACCGGCG AGCGTCAGGC CACGGCCGGC AAGATCCTGT TCAATGGCCA GGACATCATT CGCAAGCCGT CCCACGGGCG CGTGGCGCTT GGCATGGCGC GCTCGTTTCA GCTCACCAGC CTGTTCCAGA ACCTTTCAGT GCGCGAGAAC CTGCGCCTGG CAGCCCAAGG CCGTGATGGC CTGGGCGCGC TGAACTTCTG GCGCAGCGTC GAGCACAAGC GCAGCCACTG GAACACCGCC GACCAGGTGC TGGAGCGCCT GAAACTGAGC GCCCGTGCCG AAACCCTGGC GGGCGAACTG TCGCACGGCC AGCAAAGGGT GCTGGAAGTG GGCATGTCGA TCTGTGCCAA GCCCACCCTG CTGATGCTTG ACGAACCCAC TTCGGGCATG GGCATCGACG ACATCCCGGT GATGACCGAC CTGATCAGCG ACCTTGGCCG CGACCATACC GTGCTACTGA TCGAGCACAA CATGAGCATT GTCATGTCGA TCAGCCAGCG CATCACGGTG ATGAGTCACG GCCAGATCCT GGTCGAGGGT ACCCCTGAAC AGGTGCGCAA CGACGAGCGC GTACGCACCG CCTACCTTGG AGAGGCCGCC TGA
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Protein sequence | MSDYLLETRH LELAYGPFKA VAGVDLKVRA GTIHTIIGPN GAGKTSLFHC LTGERQATAG KILFNGQDII RKPSHGRVAL GMARSFQLTS LFQNLSVREN LRLAAQGRDG LGALNFWRSV EHKRSHWNTA DQVLERLKLS ARAETLAGEL SHGQQRVLEV GMSICAKPTL LMLDEPTSGM GIDDIPVMTD LISDLGRDHT VLLIEHNMSI VMSISQRITV MSHGQILVEG TPEQVRNDER VRTAYLGEAA
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