Gene PP_0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0616 
Symbol 
ID1044433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp721995 
End bp722747 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content64% 
IMG OID637144003 
Productbranched chain amino acid ABC transporter ATP-binding protein 
Protein accessionNP_742778 
Protein GI26987353 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT ACCTCCTGGA AACCCGCCAC CTGGAGCTGG CCTACGGGCC GTTCAAGGCG 
GTCGCGGGCG TTGACCTCAA AGTGCGAGCC GGCACCATCC ACACCATCAT CGGCCCCAAC
GGCGCCGGCA AGACCAGCCT GTTCCACTGC CTGACCGGCG AGCGTCAGGC CACGGCCGGC
AAGATCCTGT TCAATGGCCA GGACATCATT CGCAAGCCGT CCCACGGGCG CGTGGCGCTT
GGCATGGCGC GCTCGTTTCA GCTCACCAGC CTGTTCCAGA ACCTTTCAGT GCGCGAGAAC
CTGCGCCTGG CAGCCCAAGG CCGTGATGGC CTGGGCGCGC TGAACTTCTG GCGCAGCGTC
GAGCACAAGC GCAGCCACTG GAACACCGCC GACCAGGTGC TGGAGCGCCT GAAACTGAGC
GCCCGTGCCG AAACCCTGGC GGGCGAACTG TCGCACGGCC AGCAAAGGGT GCTGGAAGTG
GGCATGTCGA TCTGTGCCAA GCCCACCCTG CTGATGCTTG ACGAACCCAC TTCGGGCATG
GGCATCGACG ACATCCCGGT GATGACCGAC CTGATCAGCG ACCTTGGCCG CGACCATACC
GTGCTACTGA TCGAGCACAA CATGAGCATT GTCATGTCGA TCAGCCAGCG CATCACGGTG
ATGAGTCACG GCCAGATCCT GGTCGAGGGT ACCCCTGAAC AGGTGCGCAA CGACGAGCGC
GTACGCACCG CCTACCTTGG AGAGGCCGCC TGA
 
Protein sequence
MSDYLLETRH LELAYGPFKA VAGVDLKVRA GTIHTIIGPN GAGKTSLFHC LTGERQATAG 
KILFNGQDII RKPSHGRVAL GMARSFQLTS LFQNLSVREN LRLAAQGRDG LGALNFWRSV
EHKRSHWNTA DQVLERLKLS ARAETLAGEL SHGQQRVLEV GMSICAKPTL LMLDEPTSGM
GIDDIPVMTD LISDLGRDHT VLLIEHNMSI VMSISQRITV MSHGQILVEG TPEQVRNDER
VRTAYLGEAA