Gene PP_0603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0603 
SymbolileS 
ID1044417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp710201 
End bp713032 
Gene Length2832 bp 
Protein Length943 aa 
Translation table11 
GC content64% 
IMG OID637143990 
Productisoleucyl-tRNA synthetase 
Protein accessionNP_742765 
Protein GI26987340 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.633641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACT ACAAAGCCAC GCTTAACCTT CCGGACACCG CCTTCCCCAT GAAGGCCGGC 
CTGCCTCAGC GCGAACCGCA GATCCTGCAG CGCTGGGACA GCATTGGCCT GTACCAGAAG
CTGCGCGAAA TTGGCAAGGA TCGTCCCAAG TTCGTCCTGC ACGACGGCCC GCCCTATGCC
AACGGCAAGA TTCACATCGG TCATGCGCTG AACAAGATCC TCAAGGACAT GATCGTCCGT
TCCAAGACCC TGGCCGGCTT CGATGCGCCG TACGTGCCAG GTTGGGACTG CCACGGCCTG
CCGATCGAGC ACAAGGTCGA GGTTACCCAC GGCAAGCACC TCTCCGCCGA CCGTACCCGC
GAGCTGTGCC GCGAGTACGC TGCCGAGCAG ATCGAAGGGC AGAAGACCGA GTTCATCCGC
CTGGGCGTGC TGGGTGACTG GGACAACCCA TACAAGACCA TGAACTTCGC CAACGAGGCC
GGTGAAATCC GCGCCCTGGC CGAGATGGTC AAGCAAGGCT TCGTGTTCAA GGGCCTGAAG
CCGGTGAACT GGTGCTTTGA TTGCGGTTCG GCGCTGGCTG AAGCGGAAGT CGAGTACGCC
GACAAGAAGT CGCAGACCAT CGACGTGGCC TTCCCGGTTG CCGATGAAGC CAAGCTGGCC
GCCGCCTTCG GCCTGGCCTC GCTGGCCAAG CCGGCCGCCA TCGTGATCTG GACCACCACC
CCGTGGACCA TCCCGGCCAA CCAGGCTCTG AACATCCACC CGGAATTCAA GTACGCCCTG
GTCGACACCG GCGAGCGCCT GCTGGTGCTG GCTGAAGAGC TGGTCGAGTC GTGCCTGAAG
CGCTACAACC TGGAAGGTTC GGTTGTTGCC AGCGCCCAAG GTTCGGCGCT GGAGCTGATC
AACTTCCGTC ATCCGTTCTA CGATCGCCTG TCGCCAATCT ACCTGGCCGA CTACGTCGAG
CTGGGCGCCG GTACCGGCGT GGTGCATTCC TCGCCAGCCT ACGGTGAAGA CGACTTCGTC
ACCTGCAAGC GCTACGGCAT GGTCAACGAC GACATCCTTA CCCCGGTGCA GAGCAACGGC
GTGTATGTCG ACTCGCTGCC ATTCTTCGGC GGCCAGTTCA TCTGGAAGGC CAACCCGGCC
ATCGTCGAGA AGCTGAGCGA AGTCGGTGCG CTGATGCACA CCGAAACCAT CAGCCACAGC
TACATGCACT GCTGGCGCCA CAAGACCCCG CTGATCTACC GCGCCACCGC GCAGTGGTTC
GTGGGCATGG ACAAGCAGCC GAGCACCGGC GAGCCGCTGC GTGAGCGTGC GCTGAAAGCC
ATCGAAGACA CCAAGTTCGT CCCGGCCTGG GGCCAGGCGC GCCTGCACGC GATGATCGCC
AACCGCCCGG ACTGGTGCAT CTCGCGTCAG CGCAACTGGG GTGTGCCGAT CCCGTTCTTC
CTGCACAAGC AGACCGGCGA TCTGCATCCG CGCACTGTCG AACTGATGGA AGAAGTGGCC
AAGCGTGTCG AGCAGCAAGG CATCGAGGCC TGGTTCAAGC TGGACGCCGC CGAACTGCTG
GGCGCTGAAG CCGACCAGTA CGACAAGATC GCCGACACCC TCGACGTGTG GTTCGACTCG
GGCACCACTC ACTGGCACGT ACTGCGTGGC TCGCACGACA TCGGCCACGC CACCGGCCCG
CGCGCTGACC TGTACCTGGA AGGTTCCGAC CAGCACCGCG GCTGGTTCCA CTCGTCCTTG
CTGACCGGTT GCGCCATCGA TAACCATGCG CCATACCGCG AGCTGTTGAC CCACGGCTTC
ACCGTGGACG AGAACGGCCG CAAGATGTCC AAGTCGCTGG GCAACACCAT CGAACCGGAG
AAGGTCAACA ACACCCTGGG TGCCGATATC CTGCGCCTGT GGGTTTCGGC CACCGACTAT
TCCGGTGAAA TGGCCGTTTC CGAGCAGATC CTGCAGCGCA GTGCCGACGC CTACCGGCGT
ATCCGCAATA CCGCCCGCTT CCTGCTGTCC AACCTGTCCG GCTTCGACCC GGCCCGCGAC
CTGCTGGCAC CGGAAGACAT GCTGGCGCTG GACCGCTGGG CCGTGGACCG TACCCTGCTG
CTGCAACGCG AACTGGAAGA GCACTACAGC GAGTACCGTT TCTGGAACGT CTACTCCAAG
GTGCACAACT TCTGCGTACA GGAGCTGGGC GGCTTCTATC TCGACATCAT CAAGGACCGC
CAGTACACCA CCGGCGCCAA CAGTGTCGCC CGCCGTTCCT GCCAGACTGC GCTGTACCAC
ATCAGCGAGG CGCTGGTGCG CTGGATCGCG CCGATCCTGG CATTCACCGC CGACGAAATC
TGGCAGTACC TGCCGGGCGA GCGCAACGAG TCGGTAATGC TCAACGGCTG GTACCAAGGC
CTGAGCGAGC TGCCGGAAGG CACCGAGTTG GACCGCGCCT ACTGGGACCG CGTGATGGCA
GTGAAGGCAT CGGTCAACAA GGAGCTGGAA AACCAGCGCA CCGCCAAGGT CATCGGCGGC
AACCTGCAAG CCGAAGTGAC CCTGTACGCC GACGAAGGCC TGAGTGCCGA CCTGGGCAAG
CTGGGTGACG AGTTGCGCTT CGTGCTGATC ACCTCGGCCG CCAGCGTGGT GCCGTTCGCA
CAGGCGCCGG CCGAAGCGGT AGCCACCGAA GTCGAAGGCC TCAAGCTGCA AGTGGTCAAG
TCCGGCCACA CCAAGTGCGG CCGTTGCTGG CACTTCCGCG CCGACGTCGG CAGCCATCCG
GAGCACCCGG AAATCTGCGG CCGTTGCGTC GACAACCTGA CCGGCTCGGG TGAGGTGCGC
CACTATGCCT AA
 
Protein sequence
MTDYKATLNL PDTAFPMKAG LPQREPQILQ RWDSIGLYQK LREIGKDRPK FVLHDGPPYA 
NGKIHIGHAL NKILKDMIVR SKTLAGFDAP YVPGWDCHGL PIEHKVEVTH GKHLSADRTR
ELCREYAAEQ IEGQKTEFIR LGVLGDWDNP YKTMNFANEA GEIRALAEMV KQGFVFKGLK
PVNWCFDCGS ALAEAEVEYA DKKSQTIDVA FPVADEAKLA AAFGLASLAK PAAIVIWTTT
PWTIPANQAL NIHPEFKYAL VDTGERLLVL AEELVESCLK RYNLEGSVVA SAQGSALELI
NFRHPFYDRL SPIYLADYVE LGAGTGVVHS SPAYGEDDFV TCKRYGMVND DILTPVQSNG
VYVDSLPFFG GQFIWKANPA IVEKLSEVGA LMHTETISHS YMHCWRHKTP LIYRATAQWF
VGMDKQPSTG EPLRERALKA IEDTKFVPAW GQARLHAMIA NRPDWCISRQ RNWGVPIPFF
LHKQTGDLHP RTVELMEEVA KRVEQQGIEA WFKLDAAELL GAEADQYDKI ADTLDVWFDS
GTTHWHVLRG SHDIGHATGP RADLYLEGSD QHRGWFHSSL LTGCAIDNHA PYRELLTHGF
TVDENGRKMS KSLGNTIEPE KVNNTLGADI LRLWVSATDY SGEMAVSEQI LQRSADAYRR
IRNTARFLLS NLSGFDPARD LLAPEDMLAL DRWAVDRTLL LQRELEEHYS EYRFWNVYSK
VHNFCVQELG GFYLDIIKDR QYTTGANSVA RRSCQTALYH ISEALVRWIA PILAFTADEI
WQYLPGERNE SVMLNGWYQG LSELPEGTEL DRAYWDRVMA VKASVNKELE NQRTAKVIGG
NLQAEVTLYA DEGLSADLGK LGDELRFVLI TSAASVVPFA QAPAEAVATE VEGLKLQVVK
SGHTKCGRCW HFRADVGSHP EHPEICGRCV DNLTGSGEVR HYA