Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0592 |
Symbol | |
ID | 1044403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 690720 |
End bp | 691406 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637143975 |
Product | short chain dehydrogenase |
Protein accession | NP_742755 |
Protein GI | 26987330 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.23035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAATT CAAGAACTGC CCTCATCATC GGCGCCTCGC GCGGGCTTGG CCTGGGTTTG GTACAACGCC TGCACGAAGA CGGCTGGCAC ATCACTGCAA CCGTCCGTAA CCCGCAGCAG CCCGGCGGCC TGGCGAACGT CCCCGGCGTG CACATTGAGC AGCTGGAAAT GAACGACACC GTTCAGCTCG ACAGCCTGCA GCAACGCCTG CAAGGCCAGG TGTTCGACCT GATATTCGTC AACGCCGGGG TCATGGGCCC CCTGCCGCAA GACCTGGAGG CAGTACACAA CAGCGACATT GGCGATCTGT TCATGACCAA CGCCGTGGCG CCGATACGCG TGGCTCGCCG CCTGGTGGGT CAAATACGCG AAGGCAGTGG TGTGCTGGCT TTCATGAGCT CGATCCTGGG AAGCGTCACC ATCCCAGACG GTGGCGAAAT CTGCCTGTAC AAGGCCAGCA AGGCGGCACT GAACTCGATG ATCAACAGCT TCTTCGTTGA GCAGCAGCGC CCGGACCTGT GCGTGCTGGC CATGCACCCG GGCTGGGTGA AAACTGACAT GGGTGGCGAA AACGCCGAAA TCGATGTGCT CACCAGCACC CGCGGCATGA TCGAACAGAT CAAGGCCCAA AGCGGCAAGG GCGGCCTGCG TTTCATCAAC TACAAGGGCG AACCCTTGGT CTGGTGA
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Protein sequence | MANSRTALII GASRGLGLGL VQRLHEDGWH ITATVRNPQQ PGGLANVPGV HIEQLEMNDT VQLDSLQQRL QGQVFDLIFV NAGVMGPLPQ DLEAVHNSDI GDLFMTNAVA PIRVARRLVG QIREGSGVLA FMSSILGSVT IPDGGEICLY KASKAALNSM INSFFVEQQR PDLCVLAMHP GWVKTDMGGE NAEIDVLTST RGMIEQIKAQ SGKGGLRFIN YKGEPLVW
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