| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0576 |
|---|
| Symbol | |
|---|
| ID | 1044372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 674412 |
|---|
| End bp | 674981 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637143959 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | NP_742739 |
|---|
| Protein GI | 26987314 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.612846 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCGCC GTCTCGTTCT ACTGTCATTC GCGTTGTTGC TCGCTGCCTG CTCCAGCAAC
AACGTCCAGC AGGATTTCGA TGCCAGCCGC GATTTTGCCG CCTACCGTAG CTGGGCATGG
CAGGAGCCAG GCCTGCAGTA CCGCCCGGAT GACCCACGGA TCAAGAGCGA CCTCACCGAG
CAGCGCATTC GCCAGGCGGT GGCAGACCAA CTCGACCAGC GCGGCCTGCG CCCGGTACAA
GGCGGAGCGC GGCCCGACCT GACAGTACGC ACATACCTGA TCGTGGAGCA GCGCCAACAA
CAGATCACCA CCAACTACGG CGGTGGCTGG GGTGGCTACT GGGGCGGCTA CTGGGGTGGC
CCGATGTACA ACGAAACCCG CAGTGTCGAC TACAAGGTCG CCACCATCCA GGTCGACATG
TTCGATGGGC GTGACGGCAA GCTGGTATGG CGCGGCAGTG CCGAGCAGAT CATGAACAAC
TACCCGCCAA GCCCGGAAGA ACGCAACAGC GCAATCCGCA ATACCGTGGC CAAGGTGCTG
GGCAACTACC CACCGGGCAG CAAAAAATAG
|
|---|
| Protein sequence | MLRRLVLLSF ALLLAACSSN NVQQDFDASR DFAAYRSWAW QEPGLQYRPD DPRIKSDLTE
QRIRQAVADQ LDQRGLRPVQ GGARPDLTVR TYLIVEQRQQ QITTNYGGGW GGYWGGYWGG
PMYNETRSVD YKVATIQVDM FDGRDGKLVW RGSAEQIMNN YPPSPEERNS AIRNTVAKVL
GNYPPGSKK
|
|---|
| |