| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0567 |
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| Symbol | speA |
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| ID | 1044357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 658953 |
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| End bp | 660866 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637143950 |
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| Product | arginine decarboxylase |
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| Protein accession | NP_742730 |
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| Protein GI | 26987305 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.390352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTAC GACGCACACG CAAAGACGAT GGTAGCCAAT GGACCGTGGC CGACAGCCGC
AGTGTTTATG GTATCCGCCA TTGGGGCGCT GGCTATTTCG CCATCAATGA AGCCGGGCGC
GTCGAAGTAC GCCCCAACGG CCCTCAAAGC GCTCCGATCG ACCTGTTCGA ACAGGTCGAC
GAACTGCGCC AGAGCGGGTT GTCGCTGCCC TTGCTGGTAC GCTTCCCTGA CATTTTGCAG
GACCGTGTGC GCCAGCTGAC CGGTGCCTTC GACGCCAACA TCGCGCGCCT GGAATACCAG
AGCCAGTACA CCGCGCTGTA CCCGATCAAG GTCAACCAGC AGGAAGCGGT GGTGGAAAAC
ATCATCGCCA CGCAAAACGT TTCCATCGGC CTGGAAGCCG GCTCCAAACC CGAGTTGCTG
GCAGTGCTGG CGCTGGCGCC GAAGGGCGGC ACCATCGTCT GCAATGGCTA CAAGGACCGT
GAGTTCATTC GCCTGGCGCT GATGGGTCAG AAGCTTGGCC ACAATGTGTT CATCGTCATC
GAGAAAGAGT CGGAAGTGGC CCTGGTGATC GAAGAGGCCG CCGAGCTCAA GGTGAAACCA
CAGGTTGGCC TGCGCGTTCG CCTGTCGTCG TTGGCCTCGA GCAAGTGGGC CGACACCGGT
GGCGAGAAGT CCAAGTTCGG TTTGTCCGCC GCCCAGTTGC TTTCGGTGGT GCAGCGCTTC
CGCGATGCGG GCCTGGATCA GGGCATCCGC CTGCTGCACT TCCACATGGG TTCGCAGATT
GCCAACCTGG CTGACTACCA GCACGGTTTC AAGGAAGCCA TCCGTTATTA CGGCGAACTG
CGTGCGCTGG GCCTGCCGGT CGACCACATC GACGTGGGTG GCGGCCTGGG TGTGGACTAC
GACGGCACCC ACTCGCGCAA TGCCAGCTCG ATCAACTACG ACATGGACGA CTACGCCGGC
GTGGTGGTGG GCATGCTCAA GGAGTTCTGC GACGCGCAGG GCTTGCCGCA CCCGCACATC
TTCTCCGAGA GTGGCCGTTC GCTGACCGCG CACCACGCCA TGCTGGTGAT CCAGGTGACC
GACGTCGAGA AACACAACGA CGACGTACCG ACCATCGAGA ACAAGGAAGC CCTGCCCGAG
ACCGTGCAGT GGCTGGTCGA CCTGCTTGGC CCGACCGACA TCGAGATGGT CACCGAGACC
TACTGGCGCG CCACCCACTA CATGGGTGAT GTGGCCGCGC AGTACGCCGA TGGCAAGCTG
AGCCTGGGCG AGAAGGCCCT GGCCGAGCAG TGCTATTTCG CCGTGTGCCG CCGCCTGCAC
AACTCGCTGA AAGCCCGCCA GCGCTCGCAC CGCCAGGTGC TGGACGAGCT GAACGACAAG
CTGGCCGACA AGTACATCTG CAACTTCTCG GTGTTCCAGA GCCTGCCAGA CACCTGGGCC
ATCGGCCAGG TCCTGCCGAT CATCCCGCTG CACCGCTTGG ACGAAGAGCC GATGCGGCGT
GCGGTATTGC AGGACCTGAC TTGCGATTCC GACGGCAAGA TCAACCAGTA CGTTGACGAG
CAGAGCATCG AAACCAGCAT GCCGGTGCAT GCGGTGAAGG AGGGTGAGGA TTACCTGCTG
GGCGTGTTCC TGGTGGGTGC CTACCAGGAA ATCCTGGGTG ACATGCACAA CCTGTTCGGT
GACACCGATT CGGTGAACAT CTACCAGAAT GCCGACGGCA GCGTGTACCA CGCCGGTATC
GAAACCCACG ACACCATCGA AGACATGCTG CGCTACGTGC ACCTGTCGCC GGAAGAGTTG
ATGACGCATT ACCGCGACAA GGTTGCCAGC GCCAAGATCA CTGCGCGTGA GCGGACCCAG
TATCTGGATG CCTTGCGCCT GGGCTTGACC CGGTCTTCGT ACCTGTCGTC GTAA
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| Protein sequence | MSVRRTRKDD GSQWTVADSR SVYGIRHWGA GYFAINEAGR VEVRPNGPQS APIDLFEQVD
ELRQSGLSLP LLVRFPDILQ DRVRQLTGAF DANIARLEYQ SQYTALYPIK VNQQEAVVEN
IIATQNVSIG LEAGSKPELL AVLALAPKGG TIVCNGYKDR EFIRLALMGQ KLGHNVFIVI
EKESEVALVI EEAAELKVKP QVGLRVRLSS LASSKWADTG GEKSKFGLSA AQLLSVVQRF
RDAGLDQGIR LLHFHMGSQI ANLADYQHGF KEAIRYYGEL RALGLPVDHI DVGGGLGVDY
DGTHSRNASS INYDMDDYAG VVVGMLKEFC DAQGLPHPHI FSESGRSLTA HHAMLVIQVT
DVEKHNDDVP TIENKEALPE TVQWLVDLLG PTDIEMVTET YWRATHYMGD VAAQYADGKL
SLGEKALAEQ CYFAVCRRLH NSLKARQRSH RQVLDELNDK LADKYICNFS VFQSLPDTWA
IGQVLPIIPL HRLDEEPMRR AVLQDLTCDS DGKINQYVDE QSIETSMPVH AVKEGEDYLL
GVFLVGAYQE ILGDMHNLFG DTDSVNIYQN ADGSVYHAGI ETHDTIEDML RYVHLSPEEL
MTHYRDKVAS AKITARERTQ YLDALRLGLT RSSYLSS
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