| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0564 |
|---|
| Symbol | |
|---|
| ID | 1044353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 656567 |
|---|
| End bp | 657655 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637143947 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_742727 |
|---|
| Protein GI | 26987302 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5345] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0688358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGATA AGGACAAAGC CATGCTGGAC TGGAAAAACC GCGAGGCCAA AGCCGAGCCC
CGTGAGCGTG TCGACGGGCG CGGCGCTGCC GCCCGTAGCT ACCTTGGCGG CCTTTGGAGC
CGTGCCCTGG GGACCCTGAT CGGGTTGTAC CTGCTGGTGT GTATCGGCCT GGGCTGGTAC
TGGAGCCAGG AGCCTGCTCT GTTCCCGGTG CAGCAAAACG CCCAGGCAGC AGCCGAACGT
ACTGGCCAGC AGATGGTGGT GGGCTATACC ACCGTCGAAA CCCTCAAGAC CGTGGCCGGC
ACCTTGCTGA ACAAGCCGGG CGGCTACATT TCCAACGACC GCTTCCCGCC AGGGCTGTGG
ATGGACAACA TGCCAAGCTG GGAATATGGC GTGCTGGTCC AGGTCCGCGA CCTGTCCCGT
GCCCTGCGTA AAGACTTCGC CCGTTCGCAG TCGCAGTCCA CCGAAGACGC CGACCTGGCC
AAGGCCGAGC CGCGCTTCAA CTTCGACAAC AAGAGCTGGA TCCTGCCATC GAGCGAGTCG
GAGTTCGAAG AGGGCATCAA GTCGCTGACC CGCTACCAGA CCCGTCTGGC TGCCGGCGAC
AAGGGCGCTA TCTTCTATAC CCGCGCCGAC AACCTGAACA ACTGGCTGGG TGACGTCGCC
ACCCGTCTGG GCTCGCTGTC GCAGCGCCTG TCGGCCAGCG TTGGCCGGGT CAAGCTCAAC
ACCACGCTGA AGACCGAGTC GGTCGTTGCC GGCCAGGCGC CGCAGGTGGA TGAGGAGCTG
GTGGAAACCC CATGGCTGCA GATCGACAAC GTGTTCTATG AAGCCCGTGG CCAAGCCTGG
GCGCTGTCGC ACCTGCTGCG TGCCATCGAG GTGGACTTCG CCGACGTGCT GGCGAAGAAG
AATGCCACCG TCAGCGTGCG TCAGATCATC CGTGAGCTGG AGGCCTCGCA AGAGTCGCTG
TGGAGCCCGA TGGTGCTCAA CGGCAGTGGC TTCGGCATGT GGGCCAACCA CTCGTTGGTC
ATGGCCAACT ACATTTCCCG GGCCAACGCT GCGGTTATCG ATCTGCGTCA GCTGCTGTCG
CAGGGTTGA
|
|---|
| Protein sequence | MTDKDKAMLD WKNREAKAEP RERVDGRGAA ARSYLGGLWS RALGTLIGLY LLVCIGLGWY
WSQEPALFPV QQNAQAAAER TGQQMVVGYT TVETLKTVAG TLLNKPGGYI SNDRFPPGLW
MDNMPSWEYG VLVQVRDLSR ALRKDFARSQ SQSTEDADLA KAEPRFNFDN KSWILPSSES
EFEEGIKSLT RYQTRLAAGD KGAIFYTRAD NLNNWLGDVA TRLGSLSQRL SASVGRVKLN
TTLKTESVVA GQAPQVDEEL VETPWLQIDN VFYEARGQAW ALSHLLRAIE VDFADVLAKK
NATVSVRQII RELEASQESL WSPMVLNGSG FGMWANHSLV MANYISRANA AVIDLRQLLS
QG
|
|---|
| |