Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0550 |
Symbol | |
ID | 1044334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 638142 |
End bp | 638786 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637143933 |
Product | hypothetical protein |
Protein accession | NP_742713 |
Protein GI | 26987288 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.440195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACTTGA CGCCTCAGCA TGTCCTGCTT GCCGGAGCCA CCGGTCTGAC CGGTGAACAC CTGCTAGACC GCCTGCTCAA CGAGCCCACC ATCACCCGTG TCCTGGCGCC TACACGCCGG CCATTGGCCG AGCACCCGCA CCTGGAAAAC CCGGTGGGCG ACCCGGCGGT ATTCCTTCCG CAACTGGCCG GGCGGGTCGA CATCGCCTAC TGCTGCCTGG GCACCACGCT GAAGCAGGCG GGTTCCGAAT CGGCTTTCCG CGCAGTGGAT CTGGACATGG TGGTCGCCTT CAGCAAGCGT GCCCGGGAAA TGGGCGCACG GCATCTGCTG GTGATCAGTG CAGTGGGCGC CGACCCTAAG TCGTCAATTT TCTATAACCG GGTCAAGGGC GAGATGGAAG AAGCGCTCAA GGCTCAGGAC TGGCCACAGC TGACCATCGT GCGGCCCTCG TTCCTGCTGG GCGAGCGACT GGAGCCACGG CTGACTGAAC AGCTAGTTGC GCCGTTTTCT CGGTTCATAC CCGGGAAATA CCGGGGAATC GAGGCTTGTA CCCTGGCGCG GGCGCTGTGG CGGCTGGCGC TGGAGGAAGA AGACGGCGTG CGGGTTGTGG AGTCGGATGA ATTGCGCAGG TTGGGCAGGA TCTAG
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Protein sequence | MYLTPQHVLL AGATGLTGEH LLDRLLNEPT ITRVLAPTRR PLAEHPHLEN PVGDPAVFLP QLAGRVDIAY CCLGTTLKQA GSESAFRAVD LDMVVAFSKR AREMGARHLL VISAVGADPK SSIFYNRVKG EMEEALKAQD WPQLTIVRPS FLLGERLEPR LTEQLVAPFS RFIPGKYRGI EACTLARALW RLALEEEDGV RVVESDELRR LGRI
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