| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0548 |
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| Symbol | ubiD |
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| ID | 1044332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 637121 |
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| End bp | 637750 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637143931 |
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| Product | aromatic acid decarboxylase |
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| Protein accession | NP_742711 |
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| Protein GI | 26987286 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
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| TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.62115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAACGGGC CGGAACGCAT CACCCTGGCC ATGACGGGCG CCTCGGGTGC CCAGTATGGC
CTTCGCCTGC TCGATTGCCT GGTACGCGAA GACCGCGAGG TGCACTTCCT GATTTCCAAG
GCCGCACAGT TGGTGATGGC CACCGAGACG GATGTTGTGT TGCCGGCCAA GCCCCAGGCG
ATGCAGGCCT TCCTGACCGA ATACACCGGC GCGGCCGACG GGCAGATCCG TGTGTATGGC
AAGGAAGACT GGATGTCGCC GGTAGCCTCG GGTTCTGGCG CCCCGGCGGC AATGGTGGTG
GTCCCCTGTT CCACTGGCAC CTTGTCGGCC ATTGCCACTG GCGCCTGCAA CAACCTGATC
GAGCGTGCTG CCGACGTTAC CCTCAAGGAG CGTCGCCAGC TGATCCTGGT GCCACGCGAA
GCGCCATTCT CCACCATCCA CCTGGAAAAC ATGCTCAAGC TGTCGCAAAT GGGCGCGGTG
ATCCTGCCGG CGGCACCGGG GTTCTATCAC CAGCCGCAGA CCATCGACGA CCTGGTCGAC
TTTGTCGTGG CGCGTATCCT CAACCTGCTG AACATCCCCC AGGATATGTT GCCGCGTTGG
GGCGAGCACC ACTTCGGGGT GGATGATTGA
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| Protein sequence | MNGPERITLA MTGASGAQYG LRLLDCLVRE DREVHFLISK AAQLVMATET DVVLPAKPQA
MQAFLTEYTG AADGQIRVYG KEDWMSPVAS GSGAPAAMVV VPCSTGTLSA IATGACNNLI
ERAADVTLKE RRQLILVPRE APFSTIHLEN MLKLSQMGAV ILPAAPGFYH QPQTIDDLVD
FVVARILNLL NIPQDMLPRW GEHHFGVDD
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