| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0546 |
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| Symbol | |
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| ID | 1044330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 633531 |
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| End bp | 635708 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637143929 |
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| Product | GAF modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | NP_742709 |
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| Protein GI | 26987284 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGTCATT TTTACGGGCC TGTTCAAGGA CCGCTGTGCC GGCGCCGGTA CGCCTGGGGT
GACATTTTGT GCCGTTTGCG ACACATCACA GGCGTGTGCA TTGCAAAGCC TAACCGGGTG
GAGGATGCTG GGCTGACGCT CTATCTGCGG AGAATTACAA CAATGCAGAG CAATCACTTC
ACTCGCCATG CCCGGCAGGT CCATAGCGTT GCCCATGGCG GGGCCGGGGA GGGCGGCAGT
GATCCGTCCA TCGCCCGTTC CTGGCTGCGC TGCCTGGAGG ATTACCACCT CGACCCGGCG
GTGATCGAAG CGCCGGTGGT GCTTGAGCAT GGGCGCCTGC TGGAAAGCCG CGAGCGCCTG
CACCAGGTGC TGCAAATTGC CGACCATGAA ATGAACAGCC TGCACCAGCA GCTTTCCGGC
GCAGGCCACG CGGTGCTGCT GACCGACGCC CGCGGGGTGA TCCTCAATTG CGTCAGTGCC
CCCGCCGAGC GGCGCAGCTT CGAGCGTGCC GGGCTGTGGC TGGGCGCTGA CTGGAGCGAG
GCGCGCGAGG GCACCAATGG CATCGGCACA TGTCTGGTCG AGCGCCAGGC GCTGACCATC
CATCAGAACG AGCACTTCCG TGGCCGTCAC ACCGGGCTGA CCTGCTCGGC CAGCCCGGTG
TTCGACCCGC ATGGCGACCT GCTGGCGGTG CTCGACGTGT CCTCTGCGCG CCCCGACGTA
TCGCGGCAAA GCCAGTTCCA CACCATGGCG TTGGTCAACC TGTCGGCGAA GATGATCGAA
AGCTGCTATT TCCTGCGCCA TTTCGAGCAG CAATGGTTAT TGCGTTTTCA CCTGCAAGCC
GAGTCGGTCG GCCTGTTCAG CGAAGGCTTG CTGGCGTTCG ACGGCGATGG GCGCATTTGC
GCTGCCAACC AAAGCGCACT GAACCTGCTG GGTACGGTAC GGGGTGGCGT GCTGGGCAAA
CCGTTGGAGT GCTTTTTCGC GTGCAGCCAT GACGAAATGT TCAGCCGTGC CACGCCCGGC
GGCAGTGCTG TCTGGCCGCT GCGCACCCTG GACGGTCGCC AGGTGTTCGC CAGCCTGCGG
GGGCAGGCCC GGGCGCCGGT GTGGTCGGTG CCGGCCGCCC AGCCGCGGCC CGCAGGTGAA
GTGGAGCCGC TGGTCTGTCT GCTTGACCCT GCGTTGCAAA ATGATTTCCG CCGCAGCGTG
CGGGTGTTCG AGCGCGATGT GCCATTGCTG CTGCGCGGCG AGACCGGCTG TGGCAAGGAA
GCCTTCGCCC AGGCTGTGCA TCAGGCCAGT GAGCGGCGCG GCAAGCCGTT CGTCGCCATC
AACTGCGCGT CTATCCCGGA AAGCCTGATC GAGAGTGAGC TTTTCGGGTA CCGCGGCGGC
AGTTTTACCG GCGCGCGCAA GGAGGGCATG CGCGGCAAGC TGTTGCAGGC CGACGGCGGC
ACCTTGCTGC TGGACGAGAT CGGCGATATG CCGCTTGCCC TGCAAACCCG ACTGCTGCGG
GTGCTGGAGG AGCGCCAGGT GGTGCCGATC GGGGGAGAGC CGCAGGCGGT GGACGTGCGC
ATCGTCAGCG CTACGCACCG TGACCTGCTG GAACGGGTTG AACAGGGCAG TTTCCGCGAG
GACCTGTATT ACCGCCTCAA TGGCCTGGAG GTCGCGCTGC CGGCGGTACG CGAACGCAGT
GACAAGGCGC AGTTGCTGGA CTTTCTGCTG CGTCAGGAGA CGCAGGGGCA ATGGATAGAC
ATCGAGCCCC GGGCGCGGCA GGCGCTGCTC GCATTTAACT GGCCAGGGAA CGTGCGGCAG
ATGCGCAATG TGCTGCGTAC CCTGGTGGCG CTTTGCGAAG ATGCCCGCAT TACCTTTGCG
GACCTCCCCG CAGTCATCCG CACCAGCCCA CCTCTCGCGG GGGTAGGCGA GCCCGCGAAG
ATGTCCGACC AGGAAATGGA GGGCGAGGGC GTTGCCCTCG TTCGCGGGCA AGCCCGCTCC
CACAGGTCCG GCGGTGCCGC AGAGATTGAG GGTGAATCTG CAGGGACCGA GGTTCTGCTC
GACGCGGAGC GGCAAGCGCT GAAGGAGGTC CTGGAGGCAA AACACTGGCA TCTCACCCGC
GTTGCCGAGC ACTTGGGCAT CAGCCGCAAT ACCTTGTATC GAAAACTGCG CAAACACGGC
ATTACCAGGG GCGACTGA
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| Protein sequence | MGHFYGPVQG PLCRRRYAWG DILCRLRHIT GVCIAKPNRV EDAGLTLYLR RITTMQSNHF
TRHARQVHSV AHGGAGEGGS DPSIARSWLR CLEDYHLDPA VIEAPVVLEH GRLLESRERL
HQVLQIADHE MNSLHQQLSG AGHAVLLTDA RGVILNCVSA PAERRSFERA GLWLGADWSE
AREGTNGIGT CLVERQALTI HQNEHFRGRH TGLTCSASPV FDPHGDLLAV LDVSSARPDV
SRQSQFHTMA LVNLSAKMIE SCYFLRHFEQ QWLLRFHLQA ESVGLFSEGL LAFDGDGRIC
AANQSALNLL GTVRGGVLGK PLECFFACSH DEMFSRATPG GSAVWPLRTL DGRQVFASLR
GQARAPVWSV PAAQPRPAGE VEPLVCLLDP ALQNDFRRSV RVFERDVPLL LRGETGCGKE
AFAQAVHQAS ERRGKPFVAI NCASIPESLI ESELFGYRGG SFTGARKEGM RGKLLQADGG
TLLLDEIGDM PLALQTRLLR VLEERQVVPI GGEPQAVDVR IVSATHRDLL ERVEQGSFRE
DLYYRLNGLE VALPAVRERS DKAQLLDFLL RQETQGQWID IEPRARQALL AFNWPGNVRQ
MRNVLRTLVA LCEDARITFA DLPAVIRTSP PLAGVGEPAK MSDQEMEGEG VALVRGQARS
HRSGGAAEIE GESAGTEVLL DAERQALKEV LEAKHWHLTR VAEHLGISRN TLYRKLRKHG
ITRGD
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