| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0525 |
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| Symbol | |
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| ID | 1044301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 608918 |
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| End bp | 610843 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637143908 |
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| Product | B12 family TonB-dependent receptor |
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| Protein accession | NP_742688 |
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| Protein GI | 26987263 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCA GGCCCGGCCC TTTCGCGGGT AAACCCGCTC CTACGGGGAC AGCACAGTGC
TGTGGAAACC CTTTGGAACT GCCCATGAAA AAATTAGCCT GTACCACGAT TCTCTGTGCC
CCTACATTCC TTCTGGCCGC TGAGCGCGAC GACGCCCTCA AACTCCCCGA CGTGCTGATC
AGCGCCAGCC GCCAGGTCGA ATCGCGTACC GCCACCAGTG CAGCCAACAC GGTTTTCACC
CGCACCGACA TCGACCGCCT GCAACCCTCC AGCGTCACCG ACTTGCTCTC CCGCGTGCCG
GGCGTGCAAG TGGCACCTAC CGGTGGCCGT GGCAGCCTGC CGGGCATCTT TATCCGAGGC
ACCAAAGCCG CGCAAAGCCT GGTGCTGGTC GATGGCGTGC GCATCGCCAA TGCCACTTCG
GGCGACAGCG GCCTGCAGTT TCTGGACATC GACCAGATCG AGCGCATCGA AGTCCTGCGC
GGCTCGCGCT CAGCGGTATA CGGAAGCGAT GCCATTGGCG GGGTGATCCA GATCTTCACC
CGACGCAGCA ATGGCCCCGG CCTGCAGCCA CGCCTGCGCA TGGCCGCCGG CAGCAACCAG
ACATTCCAAC GCAGCCTGGG GCTTTCTGGC GGCAACGACT CGACCCGCTT CAACCTTGGC
GCCAGCCTGG ATGAAACTGC CGGTATCGAC TCGACCGGGC CATCCTTCGC CAGCGATGGT
GACCACGACG CCTACCGCAA CAAGGCGTTG AACCTGAGCC TGAGCCACAC CTTCAGTGAG
CGCTTCGAGG CCGGCTTGAA CCTGCTCGAC AGCCGTGGTC GCCGCGAATT TGACGAGCCG
CGCGGTGCAA GCCCTCAGGT GCCGTATTCG AACTTCGCTG TCAGCAGCAT CGGCAGCTAC
TTGGATGCCC AGGTCACCGA GCAGTGGAGC ACTCGGTTTG AGCTGGCCCA CAGCGAAAAC
CGCGATGAAA GCCGAGACAA GCTCAGCCAC TCAAGCGCAC CTTTCAATAC CTACCGCGAC
CAAGCAACTT GGCAGAACAA CCTAGCCCTG GGTGAACACA ACAGCCTGCT GTTGGGTAGC
GACTGGTACG AAGACCGTGT CCATGCGAGT GAGGACTTCA CGGAAGACAG CCGCTGGAAT
CATGCGCTGT TCGTCCAGCA TCGCTTTCAT GACGAATACT TTTACACCGA GCTTGGCCTG
CGCCACGACA AGAATCAACA GTTTGGTGGG CAGACCACCT GGAGCGGCAG CCTGACGCTA
CCGCTGAACG AGGCCAATGA TGTGTTGCTG TCGTACAGCG AAGGTTTCCG CGCCCCCACC
TTCAACGACC TTTACTTCCC CGGCTACAAC AACCCGGAGC TCAAGCCCGA ACACTCGAAA
AGTTATGAGT TGCAATGGCG CAGCCAACTG AGCAAAAACA GCAAACTGGA GGCCTCGCTA
TACCGCACCG ACCTGCGTGA CGCGATCGAA TACAGCGAAC GACCCGAGAA TGTCGGCACC
GCGCGCATCG ACGGTTTCGA GATAGCCCTG AGCCAAGAAT GGAACAGTTG GACGTCTCAA
CTGGGCCTGG CACTGATCGA CCCGCGCAAC AGGGAGAATG GCCATACCCT ACCTCGCCGA
GCACGGCGCA CCTTGAACCT GGACGTAGAC CGCCAGTTCG ACCGCTTCGC TGTTGGCGCT
ACCTGGCAGG CAGTCAGCAG CAGTTACAAC GATGAAGGCA ATAGTGACCC CATTGCAGGC
TACGGCATCG TGGGCCTGCG CGGAAGCTGG GTAGCAAGCC GCGAGCTTAC GCTCGACCTG
AAGCTGGACA ACCTGCTGGG AAAGCAGTAC AGCCGCGTCC ACTACAACCA CCAGGGCAAC
GACTACGGCT ATCGCGAAGA AAGACGCACT TGGCTCTTGA GCATCACCTG GACACCGGCG
CTTTAG
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| Protein sequence | MASRPGPFAG KPAPTGTAQC CGNPLELPMK KLACTTILCA PTFLLAAERD DALKLPDVLI
SASRQVESRT ATSAANTVFT RTDIDRLQPS SVTDLLSRVP GVQVAPTGGR GSLPGIFIRG
TKAAQSLVLV DGVRIANATS GDSGLQFLDI DQIERIEVLR GSRSAVYGSD AIGGVIQIFT
RRSNGPGLQP RLRMAAGSNQ TFQRSLGLSG GNDSTRFNLG ASLDETAGID STGPSFASDG
DHDAYRNKAL NLSLSHTFSE RFEAGLNLLD SRGRREFDEP RGASPQVPYS NFAVSSIGSY
LDAQVTEQWS TRFELAHSEN RDESRDKLSH SSAPFNTYRD QATWQNNLAL GEHNSLLLGS
DWYEDRVHAS EDFTEDSRWN HALFVQHRFH DEYFYTELGL RHDKNQQFGG QTTWSGSLTL
PLNEANDVLL SYSEGFRAPT FNDLYFPGYN NPELKPEHSK SYELQWRSQL SKNSKLEASL
YRTDLRDAIE YSERPENVGT ARIDGFEIAL SQEWNSWTSQ LGLALIDPRN RENGHTLPRR
ARRTLNLDVD RQFDRFAVGA TWQAVSSSYN DEGNSDPIAG YGIVGLRGSW VASRELTLDL
KLDNLLGKQY SRVHYNHQGN DYGYREERRT WLLSITWTPA L
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