| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0515 |
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| Symbol | ribE-1 |
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| ID | 1044290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 601827 |
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| End bp | 602492 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637143898 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | NP_742678 |
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| Protein GI | 26987253 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCACCG GCATCATCGA ATCCATTGGC ACCATCCGCA GCCTGACCCC CAAGGGTGGT
GACGTGCGCG TCTACGTAGA AACCGGCAAG CTCGACCTGG GGGACGTCAA GCTCGGCGAC
AGCATCGCCG TCAACGGTGT ATGCCTCACG GCCGTAGAAC TGCCGGGCGA CGGCTTCTGG
GCCGATGTCA GCGTCGAAAC CCTCAAGCGC ACCGCCTTCA TCGACCTCAA GAGCGGCAGC
AAGGTCAACC TGGAAAAAGC CCTGACCCCC ACTACCCGCC TGGGCGGGCA CCTGGTCAGC
GGCCACGTCG ACGGGGTTGG CGAAATCATT TCGCGCAGCG ATAACGCCCG CGCCATCCAG
TTCCGCGTGC GTGCACCGAA GGAACTGGCC AAGTACATCG CCCACAAGGG TTCGATCACC
GTCGACGGCA CCAGCCTGAC GGTCAATGAG GTCAATGGCG CCGAATTCGA GCTGACCATT
GTCCCGCACA CTCTGTCCGA AACCATCATG GCCGATTACC GTGCAGGGCG TCGGGTAAAC
CTTGAGGTCG ACCTGCTGGC CCGTTACCTG GAGCGCTTGC TGCTGGGTGA CAAGGCCGCC
GAACCGAGCA AGGGCAGTGG CATTACCGAA AGCTTCCTGG CCGCCAATGG CTTCTTGAAA
TCCTGA
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| Protein sequence | MFTGIIESIG TIRSLTPKGG DVRVYVETGK LDLGDVKLGD SIAVNGVCLT AVELPGDGFW
ADVSVETLKR TAFIDLKSGS KVNLEKALTP TTRLGGHLVS GHVDGVGEII SRSDNARAIQ
FRVRAPKELA KYIAHKGSIT VDGTSLTVNE VNGAEFELTI VPHTLSETIM ADYRAGRRVN
LEVDLLARYL ERLLLGDKAA EPSKGSGITE SFLAANGFLK S
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