Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0510 |
Symbol | trx-1 |
ID | 1044284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 598070 |
End bp | 598942 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637143894 |
Product | thioredoxin |
Protein accession | NP_742674 |
Protein GI | 26987249 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAAG ACACGCCTTA CATTTTCGAC GCCACCGATA CCAACTTCCA GCAACTGGTG ATCGAGAACT CCTTCCACAA GCCGGTGCTG GTGGACTTCT GGGCCGAGTG GTGCGCGCCG TGCAAGGCGC TGATGCCTTT GCTGGCAAAG ATTGCCGAGG GTTACCAGGG CGAACTGCTG CTGGCCAAGA TCAACTGCGA CGTGGAGCAA CAGGTGGTTG CCCAGTTCGG CATCCGTAGC CTGCCGACAG TGGTGCTGTT CAAGGACGGC CAGCCGGTGG ACGGTTTTGC CGGGGCACAA CCGGAATCGG CGATCCGCGC CATGCTCGAG CCGCATGTAC AAATGCCCGC CGCGCCCACC GCCGCGCCAC TGGAGCAGGC AAAGGCACTG TTTGCCGAAA GCCGTTTTGC CGAAACCGAA ACGCTGCTAC AGGCGCTGCT GGGTGAGGAC AACAGCAATG CCGAGGCGCT GATCCTGTAT GCCCGCTGCC TGGCCGAGCG TGGCGAGCTG GGCGAAGCGC AAGTGGTGCT GGATGCAGTC AAGACTGACG AACACAAAGC TGCGCTGGCC GGTGCCAAGG CCCAGCTGAC CTTCCTGCGC CAGGCTGCCA GCCTGCCGGA AGTGGCTGAC CTTAAAAGCC GTCTGGCGCA GAACCCGCAA GACGACGAGG CGGCTTATCA GCTGAGCATT CAGCAACTGG CTCGCCAGCA GTACGAGGCG GCGCTGGAAG GTCTGCTGAA GCTGTTCCAG CGTAACCGTG GCTACGAGAA CGGGCTGCCG CAGAAGGCGC TGTTGCAGGT GTTCGAGTTG CTGGGTGGCG ATCACCCGCT GGTTGGTGTT TATCGTCGCA AGCTGTCGGC GGCGATGTTC TGA
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Protein sequence | MTQDTPYIFD ATDTNFQQLV IENSFHKPVL VDFWAEWCAP CKALMPLLAK IAEGYQGELL LAKINCDVEQ QVVAQFGIRS LPTVVLFKDG QPVDGFAGAQ PESAIRAMLE PHVQMPAAPT AAPLEQAKAL FAESRFAETE TLLQALLGED NSNAEALILY ARCLAERGEL GEAQVVLDAV KTDEHKAALA GAKAQLTFLR QAASLPEVAD LKSRLAQNPQ DDEAAYQLSI QQLARQQYEA ALEGLLKLFQ RNRGYENGLP QKALLQVFEL LGGDHPLVGV YRRKLSAAMF
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