Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0490 |
Symbol | |
ID | 1044260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 578030 |
End bp | 578980 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637143875 |
Product | formate dehydrogenase, beta subunit |
Protein accession | NP_742655 |
Protein GI | 26987230 |
COG category | [C] Energy production and conversion |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
TIGRFAM ID | [TIGR01582] formate dehydrogenase, beta subunit, Fe-S containing |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.373896 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCAGCC AAGACATCAT CGCCCGCTCG GCCACCACTA CCGTGCCGCC CTCGGTGCGT CAGCAGGAGG AGGTCGCCAA GCTGATCGAC ACTACCAAGT GCATCGGCTG CAAGGCCTGC CAGGTGGCGT GCTCGGAGTG GAATGAACTG CGTGACGAGG TTGGCCACAA CCACGGCACC TACGACAACC CCCAGGACCT CACTGCCGAG ACCTGGACAC TGATGCGCTT TACCGAGCAT GAGCGCGACG ACGGCAACCT GGAGTGGCTG ATCCGCAAGG ACGGTTGCAT GCACTGTGCC GACCCAGGTT GCCTGAAGGC ATGCCCGAGC CCGGGCGCGA TCATCAAGCA CGCCAACGGT ATCGTCGACT TCAACCAGGA CCACTGCATC GGCTGCGGCT ACTGCATCAC CGGCTGCCCG TTCAACATCC CGCGTATCTC GCAGAAAGAC CACAAGGCGT ACAAGTGCAC CCTGTGTTCC GATCGCGTGA GCGTGGGGCT GGAGCCGGCA TGCGTGAAAA CCTGCCCGAC CGGGGCGATC GTGTTCGGCA GCAAGGACGA GATGAAAGTG CATGCGGCCG AGCGCATCGT CGATCTGAAG TCGCGGGGCT ACGACAAGGC CGGGCTGTAC GACCCGGACG GCGTCGGTGG TACCCACGTG ATGTACGTGC TGCACCATGC CGACACGCCG AAGCTGTATG CCGGCCTGCC GGACCAGCCA GTGATCAGCC CGTTGGTAGG GTTGTGGAAG GGCTTCACCA AGCCGCTGGC GCTGTTGGCC ATGGGCGCGG CGGTGCTGGC GGGGTTCTTC CACTATGTGC GGATCGGCCC ACAGCGTGTC GAGGAGGATG AACACCCGAC ACCGCCGGAC GAAAGCGTGC ATCAAGTGGA CCCGTCGGTC CATGTCTATG ATCCGAAGCA GCCCGGTGGG CAAGGGGAGC AGCGGCCATG A
|
Protein sequence | MASQDIIARS ATTTVPPSVR QQEEVAKLID TTKCIGCKAC QVACSEWNEL RDEVGHNHGT YDNPQDLTAE TWTLMRFTEH ERDDGNLEWL IRKDGCMHCA DPGCLKACPS PGAIIKHANG IVDFNQDHCI GCGYCITGCP FNIPRISQKD HKAYKCTLCS DRVSVGLEPA CVKTCPTGAI VFGSKDEMKV HAAERIVDLK SRGYDKAGLY DPDGVGGTHV MYVLHHADTP KLYAGLPDQP VISPLVGLWK GFTKPLALLA MGAAVLAGFF HYVRIGPQRV EEDEHPTPPD ESVHQVDPSV HVYDPKQPGG QGEQRP
|
| |