| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0473 |
|---|
| Symbol | rplO |
|---|
| ID | 1044238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 559450 |
|---|
| End bp | 559884 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637143859 |
|---|
| Product | 50S ribosomal protein L15 |
|---|
| Protein accession | NP_742639 |
|---|
| Protein GI | 26987214 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0200] Ribosomal protein L15 |
|---|
| TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.874189 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.00000311349 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA ATGATCTGAG TCCAGCGCCG GGTTCCCGTC GCGAGAAGCA TCGTCCAGGT
CGTGGTATCG GTAGCGGTCT GGGTAAGACC GGCGGCCGTG GCCACAAAGG TCAGACTTCC
CGTTCGGGTG GTTCGATCGC TCCTGGCTTC GAAGGCGGTC AACAGCCGCT GCACCGTCGC
CTGCCGAAGT TCGGCTTCGT TTCCCTGAAA GCCATGGACC GCGCTGAAGT GCGTCTGTCC
GAGCTGGCCA AAGTGGAAGG CGACGTGATC TCCGTGCAAT CCCTGAAGGA TGCCAACGTG
ATCAACCAGC ACATTCAGCG TGTGAAAATC ATGCTGTCTG GCGAAGTTAC TCGCGCAGTC
ACCATCAAGG GTATCGCAGC CACCAAGGGT GCGCGTGCGG CTATCGAAGC AGCTGGCGGC
AAATTCGAGG AATAA
|
|---|
| Protein sequence | MKLNDLSPAP GSRREKHRPG RGIGSGLGKT GGRGHKGQTS RSGGSIAPGF EGGQQPLHRR
LPKFGFVSLK AMDRAEVRLS ELAKVEGDVI SVQSLKDANV INQHIQRVKI MLSGEVTRAV
TIKGIAATKG ARAAIEAAGG KFEE
|
|---|
| |